RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 PRRT3Q5FWE3 981 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 EOGTQ5NDL2 527 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 MLIPQ5VWP3 458 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 CASP12Q6UXS9 341 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 SPATC1Q76KD6 591 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 AMIGO1Q86WK6 493 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 CADM3Q8N126 398 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 UBE2J2Q8N2K1 259 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 RAB42Q8N4Z0 105 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 DENND6BQ8NEG7 585 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 OR5T3Q8NGG3 340 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 ZFPM2Q8WW38 1151 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 LRR1Q96L50 414 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 ZNF607Q96SK3 696 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 ZNF304Q9HCX3 659 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 NEUROD4Q9HD90 331 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 MRPS2Q9Y399 296 aaKnown RBP8.88□□□□□ -0.99
CUX1-206ENST00000437600 DNMT3AQ9Y6K1 912 aaPredicted RBP8.88□□□□□ -0.99
CUX1-206ENST00000437600 E9PQ18 207 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 HCRTR1O43613 425 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 CTSVO60911 334 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 RPLP0P05388 317 aaKnown RBP8.88□□□□□ -0.99
CUX1-206ENST00000437600 IGHV4-34P06331 123 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 OSMP13725 252 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 CD79BP40259 229 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 PPM1FP49593 454 aaPredicted RBP8.88□□□□□ -0.99
CUX1-206ENST00000437600 MAN2A2P49641 1150 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 CAV3P56539 151 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 CTAG1AP78358 180 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 INSL4Q14641 139 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 SF3B4Q15427 424 aaKnown RBP eCLIP8.88□□□□□ -0.995e-6■■■■□ 20.8
CUX1-206ENST00000437600 SNAPC1Q16533 368 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 ZNF311Q5JNZ3 666 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 FAM111BQ6SJ93 734 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 NKAIN4Q8IVV8 208 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 GJD3Q8N144 294 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 DEPDC4Q8N2C3 294 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 FAM46DQ8NEK8 389 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 SRMSQ9H3Y6 488 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 PELI2Q9HAT8 420 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 SNTG1Q9NSN8 517 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 P2RX2Q9UBL9 471 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 POU2F3Q9UKI9 436 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 TMA7Q9Y2S6 64 aaKnown RBP8.88□□□□□ -0.99
CUX1-206ENST00000437600 THADAQ6YHU6 1953 aa8.88□□□□□ -0.99
CUX1-206ENST00000437600 A0A087WUU8 490 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 GPR89AB7ZAQ6 455 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 ZIC2O95409 532 aaPredicted RBP8.87□□□□□ -0.99
CUX1-206ENST00000437600 HBQ1P09105 142 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 GKN3PP0CG01 181 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 GPR89BP0CG08 455 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 TYRP1P17643 537 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 AZGP1P25311 298 aaKnown RBP8.87□□□□□ -0.99
CUX1-206ENST00000437600 RPS19P39019 145 aaKnown RBP8.87□□□□□ -0.99
CUX1-206ENST00000437600 DMWDQ09019 674 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 GPR18Q14330 331 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 GPR68Q15743 365 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 PLAG1Q6DJT9 500 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 SLC30A6Q6NXT4 461 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 FBXO42Q6P3S6 717 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 USP30Q70CQ3 517 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 LHFPL3Q86UP9 236 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 TRIM48Q8IWZ4 208 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 NUP43Q8NFH3 380 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 GATAD2BQ8WXI9 593 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 FAM131CQ96AQ9 280 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 FAM46AQ96IP4 442 aaKnown RBP8.87□□□□□ -0.99
CUX1-206ENST00000437600 SMAD5Q99717 465 aaKnown RBP8.87□□□□□ -0.99
CUX1-206ENST00000437600 RBCK1Q9BYM8 510 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 POLMQ9NP87 494 aaPredicted RBP8.87□□□□□ -0.99
CUX1-206ENST00000437600 A4GALTQ9NPC4 353 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 MAN2C1Q9NTJ4 1040 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 CHST2Q9Y4C5 530 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 FAM183AA6NL82 134 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 P2RX6O15547 441 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 CLEC3AO75596 197 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 SEMA3DO95025 777 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 SLC2A10O95528 541 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 SPNP16150 400 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 HOXB6P17509 224 aaKnown RBP8.87□□□□□ -0.99
CUX1-206ENST00000437600 GPR4P46093 362 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 GIPRP48546 466 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 PDX1P52945 283 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 OXA1LQ15070 435 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 TBCEQ15813 527 aaPredicted RBP8.87□□□□□ -0.99
CUX1-206ENST00000437600 ZMAT1Q5H9K5 638 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 STEAP3Q658P3 488 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 FAM92BQ6ZTR7 304 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 VN1R4Q7Z5H5 301 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 ESX1Q8N693 406 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 POC5Q8NA72 575 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 TSTD1Q8NFU3 115 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 OR2L8Q8NGY9 312 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 SMAP2Q8WU79 429 aaPredicted RBP8.87□□□□□ -0.99
CUX1-206ENST00000437600 QRFPRQ96P65 431 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 OR7D2Q96RA2 312 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 TSSK6Q9BXA6 273 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 POLR2J2Q9GZM3 115 aaKnown RBP8.87□□□□□ -0.99
CUX1-206ENST00000437600 SEMA4GQ9NTN9 838 aa8.87□□□□□ -0.99
CUX1-206ENST00000437600 UNC13CQ8NB66 2214 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms