RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	MACROD1	Q9BQ69	325 aa		5.8	□□□□□ -1.48
ECHDC1-208	ENST00000436638	EFHD1	Q9BUP0	239 aa		5.8	□□□□□ -1.48
ECHDC1-208	ENST00000436638	MS4A8	Q9BY19	250 aa		5.8	□□□□□ -1.48
ECHDC1-208	ENST00000436638	MRPL37	Q9BZE1	423 aa	Known RBP	5.8	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ZMAT3	Q9HA38	289 aa	Known RBP	5.8	□□□□□ -1.48
ECHDC1-208	ENST00000436638	BRF2	Q9HAW0	419 aa		5.8	□□□□□ -1.48
ECHDC1-208	ENST00000436638	VCX3A	Q9NNX9	186 aa		5.8	□□□□□ -1.48
ECHDC1-208	ENST00000436638	DMRT3	Q9NQL9	472 aa		5.8	□□□□□ -1.48
ECHDC1-208	ENST00000436638	AP5S1	Q9NUS5	200 aa		5.8	□□□□□ -1.48
ECHDC1-208	ENST00000436638	RIC8B	Q9NVN3	520 aa		5.8	□□□□□ -1.48
ECHDC1-208	ENST00000436638	FOXJ2	Q9P0K8	574 aa		5.8	□□□□□ -1.48
ECHDC1-208	ENST00000436638	DHCR7	Q9UBM7	475 aa	Known RBP	5.8	□□□□□ -1.48
ECHDC1-208	ENST00000436638	TNFRSF10D	Q9UBN6	386 aa		5.8	□□□□□ -1.48
ECHDC1-208	ENST00000436638	PADI1	Q9ULC6	663 aa		5.8	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SLC12A4	Q9UP95	1085 aa		5.8	□□□□□ -1.48
ECHDC1-208	ENST00000436638	FAM32A	Q9Y421	112 aa	Known RBP	5.8	□□□□□ -1.48
ECHDC1-208	ENST00000436638	TMEM184B	Q9Y519	407 aa	Predicted RBP	5.8	□□□□□ -1.48
ECHDC1-208	ENST00000436638	PCDHGA9	Q9Y5G4	932 aa	Known RBP	5.8	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SLC22A7	Q9Y694	548 aa		5.8	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CACNG2	Q9Y698	323 aa		5.8	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SPACA6	W5XKT8	324 aa		5.8	□□□□□ -1.48
ECHDC1-208	ENST00000436638	RIF1	Q5UIP0	2472 aa	Known RBP	5.8	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638		A0A0A6YYC8	382 aa	Predicted RBP	5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638		A0A1W2PNU3	283 aa	Predicted RBP	5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	MED19	A0JLT2	244 aa	Predicted RBP	5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	LRIT2	A6NDA9	550 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	TMEM210	A6NLX4	147 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	MAGEB17	A8MXT2	336 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CDRT15L2	A8MXV6	281 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638		H0YIG0	161 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638		I3L1I5	382 aa	Predicted RBP	5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SAP18	O00422	153 aa	Known RBP	5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	UBFD1	O14562	309 aa	Known RBP	5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	KLF11	O14901	512 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	T	O15178	435 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	RRP8	O43159	456 aa	Known RBP	5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ITM2A	O43736	263 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	B3GALT2	O43825	422 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SSX5	O60225	188 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	BCAS2	O75934	225 aa	Predicted RBP	5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SEMA3D	O95025	777 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	NSA2	O95478	260 aa	Known RBP	5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	PDYN	P01213	254 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	IL6	P05231	212 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	HSMCR30	P0CW71	290 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	KIT	P10721	976 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	LIPC	P11150	499 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ZNF28	P17035	718 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	TCN2	P20062	427 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	TAGLN2	P37802	199 aa	Known RBP	5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	OR1D4	P47884	311 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	KCNJ5	P48544	419 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	RPL14	P50914	215 aa	Known RBP	5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	RPS15	P62841	145 aa	Known RBP	5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	TRA2B	P62995	288 aa	Known RBP	5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	OCA2	Q04671	838 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CHAF1B	Q13112	559 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	DEFB134	Q4QY38	66 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	FLYWCH1	Q4VC44	716 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	PDCD4	Q53EL6	469 aa	Known RBP	5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	TCHHL1	Q5QJ38	904 aa	Predicted RBP	5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ATPAF1	Q5TC12	328 aa	Predicted RBP	5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	C6orf163	Q5TEZ5	329 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	MLIP	Q5VWP3	458 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CLEC6A	Q6EIG7	209 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	GTF2IRD2B	Q6EKJ0	949 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	OR4C11	Q6IEV9	310 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CYP20A1	Q6UW02	462 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	PAGE2	Q7Z2X7	111 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	GTF2IRD2	Q86UP8	949 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	NUDT13	Q86X67	352 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CLVS1	Q8IUQ0	354 aa	Predicted RBP	5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	DSEL	Q8IZU8	1212 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	LIX1	Q8N485	282 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	METTL27	Q8N6F8	245 aa	Predicted RBP	5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ZNF781	Q8N8C0	355 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ZBTB34	Q8NCN2	500 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ZNF248	Q8NDW4	579 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ADCY4	Q8NFM4	1077 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	OR9A4	Q8NGU2	314 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	TWIST2	Q8WVJ9	160 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	KCNE4	Q8WWG9	221 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CKAP2	Q8WWK9	683 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	MS4A6E	Q96DS6	147 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	MAGED4	Q96JG8	741 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	FAM71F1	Q96KD3	344 aa	Predicted RBP	5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	C10orf90	Q96M02	699 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	GBP5	Q96PP8	586 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	F2RL3	Q96RI0	385 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	KCNA7	Q96RP8	456 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	HBEGF	Q99075	208 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CCDC28B	Q9BUN5	200 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	THUMPD3	Q9BV44	507 aa	Known RBP	5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	YIPF3	Q9GZM5	350 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	C6orf62	Q9GZU0	229 aa	Predicted RBP	5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SLC26A1	Q9H2B4	701 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	OR51B5	Q9H339	312 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	WDR41	Q9HAD4	459 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ASCL3	Q9NQ33	180 aa		5.79	□□□□□ -1.48

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