RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 STK25O00506 426 aa11.07□□□□□ -0.64
CD44-209ENST00000433892 EMC8O43402 210 aa11.07□□□□□ -0.64
CD44-209ENST00000433892 LALBAP00709 142 aa11.07□□□□□ -0.64
CD44-209ENST00000433892 CSF3P09919 207 aa11.07□□□□□ -0.64
CD44-209ENST00000433892 CCNYL3P0C7X3 344 aa11.07□□□□□ -0.64
CD44-209ENST00000433892 MYOGP15173 224 aa11.07□□□□□ -0.64
CD44-209ENST00000433892 GNSP15586 552 aa11.07□□□□□ -0.64
CD44-209ENST00000433892 IFNGR2P38484 337 aa11.07□□□□□ -0.64
CD44-209ENST00000433892 DMPKQ09013 629 aa11.07□□□□□ -0.64
CD44-209ENST00000433892 TPBGQ13641 420 aa11.07□□□□□ -0.64
CD44-209ENST00000433892 TRAM2Q15035 370 aa11.07□□□□□ -0.64
CD44-209ENST00000433892 CCDC92Q53HC0 331 aaPredicted RBP11.07□□□□□ -0.64
CD44-209ENST00000433892 PDZK1Q5T2W1 519 aa11.07□□□□□ -0.64
CD44-209ENST00000433892 DDI2Q5TDH0 399 aa11.07□□□□□ -0.64
CD44-209ENST00000433892 DGLUCYQ7Z3D6 616 aa11.07□□□□□ -0.64
CD44-209ENST00000433892 ADGRD2Q7Z7M1 963 aa11.07□□□□□ -0.64
CD44-209ENST00000433892 NKAIN4Q8IVV8 208 aa11.07□□□□□ -0.64
CD44-209ENST00000433892 GALNT6Q8NCL4 622 aa11.07□□□□□ -0.64
CD44-209ENST00000433892 OR4F15Q8NGB8 312 aa11.07□□□□□ -0.64
CD44-209ENST00000433892 DIO2Q92813 273 aa11.07□□□□□ -0.64
CD44-209ENST00000433892 ELP4Q96EB1 424 aa11.07□□□□□ -0.64
CD44-209ENST00000433892 MCOLN1Q9GZU1 580 aa11.07□□□□□ -0.64
CD44-209ENST00000433892 ZFR2Q9UPR6 939 aaKnown RBP11.07□□□□□ -0.64
CD44-209ENST00000433892 GPSM3Q9Y4H4 160 aa11.07□□□□□ -0.64
CD44-209ENST00000433892 MEIOCA2RUB1 952 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 GUCY1B2O75343 617 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 KAT7O95251 611 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 ZIC2O95409 532 aaPredicted RBP11.06□□□□□ -0.64
CD44-209ENST00000433892 PEBP1P30086 187 aaKnown RBP11.06□□□□□ -0.64
CD44-209ENST00000433892 GPR4P46093 362 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 OMPP47874 163 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 SOX9P48436 509 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 CDH11P55287 796 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 ST3GAL3Q11203 375 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 LRRC32Q14392 662 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 PYDC2Q56P42 97 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 XKRXQ6PP77 449 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 QSOX2Q6ZRP7 698 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 RASSF6Q6ZTQ3 369 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 C16orf62Q7Z3J2 963 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 MRGPREQ86SM8 312 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 FAM181AQ8N9Y4 354 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 BADQ92934 168 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 DMRTB1Q96MA1 342 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 FCRL4Q96PJ5 515 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 DCLRE1CQ96SD1 692 aaKnown RBP11.06□□□□□ -0.64
CD44-209ENST00000433892 PHOX2BQ99453 314 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 ARHGDIGQ99819 225 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 ARHGAP9Q9BRR9 750 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 BTBD1Q9H0C5 482 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 PHPT1Q9NRX4 125 aaPredicted RBP11.06□□□□□ -0.64
CD44-209ENST00000433892 WDR70Q9NW82 654 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 COMMD3Q9UBI1 195 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 APOBEC3BQ9UH17 382 aaKnown RBP11.06□□□□□ -0.64
CD44-209ENST00000433892 STON1Q9Y6Q2 735 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 SCN3AQ9NY46 2000 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 MDC1Q14676 2089 aaKnown RBP11.06□□□□□ -0.64
CD44-209ENST00000433892 KDM4EB2RXH2 506 aaPredicted RBP11.06□□□□□ -0.64
CD44-209ENST00000433892 GPR89AB7ZAQ6 455 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 SYT5O00445 386 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 PROM1O43490 865 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 IDH3BO43837 385 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 PRICKLE3O43900 615 aaPredicted RBP11.06□□□□□ -0.64
CD44-209ENST00000433892 CSF2P04141 144 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 CEACAM5P06731 702 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 ASGR2P07307 311 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 GPR89BP0CG08 455 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 GABRA5P31644 462 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 GJA4P35212 333 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 PDX1P52945 283 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 BTN3A2P78410 334 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 C6orf132Q5T0Z8 1188 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 TANGO2Q6ICL3 276 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 HSDL2Q6YN16 418 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 GET4Q7L5D6 327 aaPredicted RBP11.06□□□□□ -0.64
CD44-209ENST00000433892 OR4Q3Q8NH05 313 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 PIGXQ8TBF5 258 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 MOAP1Q96BY2 351 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 CHFRQ96EP1 664 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 ST6GAL2Q96JF0 529 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 ZNF681Q96N22 645 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 TMED9Q9BVK6 235 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 HDHD5Q9BXW7 423 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 SLC22A4Q9H015 551 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 C11orf54Q9H0W9 315 aaPredicted RBP11.06□□□□□ -0.64
CD44-209ENST00000433892 GIMAP4Q9NUV9 329 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 GSTK1Q9Y2Q3 226 aa11.06□□□□□ -0.64
CD44-209ENST00000433892 EXOSC1Q9Y3B2 195 aaKnown RBP11.06□□□□□ -0.64
CD44-209ENST00000433892 ATG2BQ96BY7 2078 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 IRGMA1A4Y4 181 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 CASKO14936 926 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 POLR1CO15160 346 aaPredicted RBP11.05□□□□□ -0.64
CD44-209ENST00000433892 NARSO43776 548 aaKnown RBP11.05□□□□□ -0.64
CD44-209ENST00000433892 SLC2A10O95528 541 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 THY1P04216 161 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 AHRP35869 848 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 SLC1A3P43003 542 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 RGS8P57771 180 aaPredicted RBP11.05□□□□□ -0.64
CD44-209ENST00000433892 SNRPNP63162 240 aaKnown RBP11.05□□□□□ -0.64
CD44-209ENST00000433892 ASAH1Q13510 395 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms