RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 PAQR8Q8TEZ7 354 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 PIK3R3Q92569 461 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 NR4A3Q92570 626 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 C16orf58Q96GQ5 468 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 SLC35G5Q96KT7 338 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 FRMD6Q96NE9 622 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 LMF2Q9BU23 707 aaKnown RBP14.27□□□□□ -0.13
TREX1-201ENST00000433541 FAM107BQ9H098 131 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 RABEP2Q9H5N1 569 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 CCDC134Q9H6E4 229 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 DEPPQ9NTK1 212 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 NPIPA1Q9UND3 350 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 CHCHD2Q9Y6H1 151 aaPredicted RBP14.27□□□□□ -0.13
TREX1-201ENST00000433541 CCDC154A6NI56 674 aa14.26□□□□□ -0.13
TREX1-201ENST00000433541 RFXANKO14593 260 aa14.26□□□□□ -0.13
TREX1-201ENST00000433541 UGT2B11O75310 529 aa14.26□□□□□ -0.13
TREX1-201ENST00000433541 ACP2P11117 423 aa14.26□□□□□ -0.13
TREX1-201ENST00000433541 UQCRC2P22695 453 aa14.26□□□□□ -0.13
TREX1-201ENST00000433541 GAB1Q13480 694 aa14.26□□□□□ -0.13
TREX1-201ENST00000433541 CYP27C1Q4G0S4 372 aa14.26□□□□□ -0.13
TREX1-201ENST00000433541 TBCELQ5QJ74 424 aa14.26□□□□□ -0.13
TREX1-201ENST00000433541 BICRALQ6AI39 1079 aa14.26□□□□□ -0.13
TREX1-201ENST00000433541 ZCCHC12Q6PEW1 402 aa14.26□□□□□ -0.13
TREX1-201ENST00000433541 GALNT10Q86SR1 603 aa14.26□□□□□ -0.13
TREX1-201ENST00000433541 PACS2Q86VP3 889 aa14.26□□□□□ -0.13
TREX1-201ENST00000433541 SLC16A11Q8NCK7 471 aa14.26□□□□□ -0.13
TREX1-201ENST00000433541 SPPL2AQ8TCT8 520 aa14.26□□□□□ -0.13
TREX1-201ENST00000433541 VPS33AQ96AX1 596 aa14.26□□□□□ -0.13
TREX1-201ENST00000433541 MIB2Q96AX9 1013 aa14.26□□□□□ -0.13
TREX1-201ENST00000433541 ZNF597Q96LX8 424 aa14.26□□□□□ -0.13
TREX1-201ENST00000433541 SLC35A5Q9BS91 424 aa14.26□□□□□ -0.13
TREX1-201ENST00000433541 OSBPL11Q9BXB4 747 aa14.26□□□□□ -0.13
TREX1-201ENST00000433541 ACTRT3Q9BYD9 372 aa14.26□□□□□ -0.13
TREX1-201ENST00000433541 NSRP1Q9H0G5 558 aaKnown RBP14.26□□□□□ -0.13
TREX1-201ENST00000433541 B4GALT7Q9UBV7 327 aa14.26□□□□□ -0.13
TREX1-201ENST00000433541 BTNL2Q9UIR0 455 aa14.26□□□□□ -0.13
TREX1-201ENST00000433541 PCDHGB3Q9Y5G1 929 aa14.26□□□□□ -0.13
TREX1-201ENST00000433541 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.26□□□□□ -0.13
TREX1-201ENST00000433541 FREM3P0C091 2139 aa14.26□□□□□ -0.13
TREX1-201ENST00000433541 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 GXYLT2A0PJZ3 443 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 PRAMEF25A6NGN4 478 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 OR6C70A6NIJ9 312 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 GSNP06396 782 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 ATP6V1C1P21283 382 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 MATN1P21941 496 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 CLK3P49761 638 aaKnown RBP14.25□□□□□ -0.13
TREX1-201ENST00000433541 PNLIPRP2P54317 469 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 GYS2P54840 703 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 CASP9P55211 416 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 RPS26P62854 115 aaKnown RBP14.25□□□□□ -0.13
TREX1-201ENST00000433541 PPIAP62937 165 aaKnown RBP14.25□□□□□ -0.13
TREX1-201ENST00000433541 PHC1P78364 1004 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 IRX1P78414 480 aaPredicted RBP14.25□□□□□ -0.13
TREX1-201ENST00000433541 POU6F2P78424 691 aaPredicted RBP14.25□□□□□ -0.13
TREX1-201ENST00000433541 FOXK1P85037 733 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 ESPL1Q14674 2120 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 TOMM20Q15388 145 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 DUSP5Q16690 384 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 DESI1Q6ICB0 168 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 CDC73Q6P1J9 531 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 FIGNL1Q6PIW4 674 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 GFRALQ6UXV0 394 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 C6orf120Q7Z4R8 191 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 SLC22A16Q86VW1 577 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 PSMA8Q8TAA3 256 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 CDS1Q92903 461 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 GIMAP5Q96F15 307 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 ITCHQ96J02 903 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 CCDC115Q96NT0 180 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 NODALQ96S42 347 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 SECISBP2Q96T21 854 aaKnown RBP14.25□□□□□ -0.13
TREX1-201ENST00000433541 EXO5Q9H790 373 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 TUBA8Q9NY65 449 aaPredicted RBP14.25□□□□□ -0.13
TREX1-201ENST00000433541 NTMQ9P121 344 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 SEC14L3Q9UDX4 400 aa14.25□□□□□ -0.13
TREX1-201ENST00000433541 CNOT11Q9UKZ1 510 aaKnown RBP14.25□□□□□ -0.13
TREX1-201ENST00000433541 NCKAP5O14513 1909 aa14.24□□□□□ -0.13
TREX1-201ENST00000433541 PINLYPA6NC86 204 aa14.24□□□□□ -0.13
TREX1-201ENST00000433541 ASPDHA6ND91 283 aa14.24□□□□□ -0.13
TREX1-201ENST00000433541 ANKUB1A6NFN9 424 aa14.24□□□□□ -0.13
TREX1-201ENST00000433541 GNB5O14775 395 aa14.24□□□□□ -0.13
TREX1-201ENST00000433541 SCO2O43819 266 aa14.24□□□□□ -0.13
TREX1-201ENST00000433541 NKX2-2O95096 273 aa14.24□□□□□ -0.13
TREX1-201ENST00000433541 UNC5CO95185 931 aa14.24□□□□□ -0.13
TREX1-201ENST00000433541 SNX4O95219 450 aa14.24□□□□□ -0.13
TREX1-201ENST00000433541 CYP4B1P13584 511 aa14.24□□□□□ -0.13
TREX1-201ENST00000433541 EDN3P14138 238 aa14.24□□□□□ -0.13
TREX1-201ENST00000433541 HPGDP15428 266 aa14.24□□□□□ -0.13
TREX1-201ENST00000433541 GNLYP22749 145 aa14.24□□□□□ -0.13
TREX1-201ENST00000433541 GDF1P27539 372 aa14.24□□□□□ -0.13
TREX1-201ENST00000433541 CASP3P42574 277 aa14.24□□□□□ -0.13
TREX1-201ENST00000433541 ANXA11P50995 505 aaKnown RBP14.24□□□□□ -0.13
TREX1-201ENST00000433541 ATP4BP51164 291 aa14.24□□□□□ -0.13
TREX1-201ENST00000433541 GNGT1P63211 74 aa14.24□□□□□ -0.13
TREX1-201ENST00000433541 RBPJQ06330 500 aa14.24□□□□□ -0.13
TREX1-201ENST00000433541 C16orf62Q7Z3J2 963 aa14.24□□□□□ -0.13
TREX1-201ENST00000433541 CPLX4Q7Z7G2 160 aa14.24□□□□□ -0.13
TREX1-201ENST00000433541 ZFP62Q8NB50 900 aaPredicted RBP14.24□□□□□ -0.13
TREX1-201ENST00000433541 GALNT11Q8NCW6 608 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms