RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 ZNF350Q9GZX5 532 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 ABCG8Q9H221 673 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 COQ10BQ9H8M1 238 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 PALMDQ9NP74 551 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 PNPLA3Q9NST1 481 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 FAM212BQ9NTI7 297 aaPredicted RBP2.37□□□□□ -2.03
CLK1-204ENST00000432425 VNN3Q9NY84 501 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 TMOD2Q9NZR1 351 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 VPS18Q9P253 973 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 RCOR3Q9P2K3 495 aaPredicted RBP2.37□□□□□ -2.03
CLK1-204ENST00000432425 PSME2Q9UL46 239 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 CCPG1Q9ULG6 757 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 C15orf41Q9Y2V0 281 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 OR1A2Q9Y585 309 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 MAP3K19Q56UN5 1328 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 DHX29Q7Z478 1369 aaKnown RBP2.37□□□□□ -2.03
CLK1-204ENST00000432425 ATP6AP2A0A1C7CYW4 349 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 XKRY2A2RUG3 117 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 ZSCAN5BA6NJL1 495 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 SLC9B1P1A6NJY1 282 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 SAP18O00422 153 aaKnown RBP2.37□□□□□ -2.03
CLK1-204ENST00000432425 CHUKO15111 745 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 HDAC3O15379 428 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 SPOPO43791 374 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 AKR7A3O95154 331 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 CXCL14O95715 111 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 IGHG3P01860 377 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 S100A9P06702 114 aaKnown RBP2.37□□□□□ -2.03
CLK1-204ENST00000432425 ABHD2P08910 425 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 TROVE2P10155 538 aaKnown RBP eCLIP2.37□□□□□ -2.03
CLK1-204ENST00000432425 ETS1P14921 441 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 PGAM2P15259 253 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 HPGDP15428 266 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 FUT1P19526 365 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 GLRA1P23415 457 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 GDF1P27539 372 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 ADSSP30520 456 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 MAGEA9P43362 315 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 UCP2P55851 309 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 CARD18P57730 90 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 KIAA1024LP59773 190 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 GMFBP60983 142 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 HAND2P61296 217 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 LIPEQ05469 1076 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 SPAG1Q07617 926 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 MFGE8Q08431 387 aaPredicted RBP2.37□□□□□ -2.03
CLK1-204ENST00000432425 KARSQ15046 597 aaKnown RBP2.37□□□□□ -2.03
CLK1-204ENST00000432425 SPHARQ15513 63 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 DPYSL2Q16555 572 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 PPP1R3AQ16821 1122 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 ANKRD55Q3KP44 614 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 FBXO48Q5FWF7 155 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 C1orf189Q5VU69 101 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 PODNL1Q6PEZ8 512 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 MFSD7Q6UXD7 560 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 AMZ2Q86W34 360 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 SPATA24Q86W54 205 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 SLC22A9Q8IVM8 553 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 SERPINA12Q8IW75 414 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 CCDC83Q8IWF9 413 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 OR52M1Q8NGK5 317 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 OR2T34Q8NGX1 318 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 GOLGA5Q8TBA6 731 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 ULK4Q96C45 1275 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 LRRC45Q96CN5 670 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 ATP6V1G3Q96LB4 118 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 RUFY1Q96T51 708 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 LLPHQ9BRT6 129 aaKnown RBP2.37□□□□□ -2.03
CLK1-204ENST00000432425 OSBPL10Q9BXB5 764 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 NFKBIZQ9BYH8 718 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 NSRP1Q9H0G5 558 aaKnown RBP2.37□□□□□ -2.03
CLK1-204ENST00000432425 WWP1Q9H0M0 922 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 TRPV6Q9H1D0 765 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 CARD9Q9H257 536 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 SYNDIG1Q9H7V2 258 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 SRD5A3Q9H8P0 318 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 SYTL2Q9HCH5 934 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 ZNF446Q9NWS9 450 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 TMEM161AQ9NX61 479 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 COX16Q9P0S2 106 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 SEC14L4Q9UDX3 406 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 ARMCX3Q9UH62 379 aaPredicted RBP2.37□□□□□ -2.03
CLK1-204ENST00000432425 CDH7Q9ULB5 785 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 PRELID1Q9Y255 219 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 ACEP12821 1306 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 PHLPP2Q6ZVD8 1323 aa2.37□□□□□ -2.03
CLK1-204ENST00000432425 A0A087X0K7 114 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 GSAPA4D1B5 854 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 H0YIG0 161 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 H0YIV9 168 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 NVLO15381 856 aaKnown RBP2.36□□□□□ -2.03
CLK1-204ENST00000432425 LANCL1O43813 399 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 RANBP6O60518 1105 aaKnown RBP2.36□□□□□ -2.03
CLK1-204ENST00000432425 FGF4P08620 206 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 MMP10P09238 476 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 PTBP1P26599 531 aaKnown RBP eCLIP2.36□□□□□ -2.03
CLK1-204ENST00000432425 OR1D2P34982 312 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 MDH1P40925 334 aaKnown RBP2.36□□□□□ -2.03
CLK1-204ENST00000432425 HAAOP46952 286 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 SLC25A1P53007 311 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms