RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 PAQR8Q8TEZ7 354 aa15.55■□□□□ 0.08
UBE3D-204ENST00000430071 ANKRA2Q9H9E1 313 aa15.55■□□□□ 0.08
UBE3D-204ENST00000430071 IL1RL2Q9HB29 575 aa15.55■□□□□ 0.08
UBE3D-204ENST00000430071 SDR39U1Q9NRG7 319 aaPredicted RBP15.55■□□□□ 0.08
UBE3D-204ENST00000430071 PNPLA3Q9NST1 481 aa15.55■□□□□ 0.08
UBE3D-204ENST00000430071 CNOT11Q9UKZ1 510 aaKnown RBP15.55■□□□□ 0.08
UBE3D-204ENST00000430071 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.55■□□□□ 0.08
UBE3D-204ENST00000430071 C2orf92A0A1B0GVN3 265 aa15.54■□□□□ 0.08
UBE3D-204ENST00000430071 LRRC3CA6NJW4 275 aa15.54■□□□□ 0.08
UBE3D-204ENST00000430071 DYRK3O43781 588 aa15.54■□□□□ 0.08
UBE3D-204ENST00000430071 CLDN14O95500 239 aa15.54■□□□□ 0.08
UBE3D-204ENST00000430071 PCSK2P16519 638 aa15.54■□□□□ 0.08
UBE3D-204ENST00000430071 ENDOUP21128 410 aaKnown RBP15.54■□□□□ 0.08
UBE3D-204ENST00000430071 DRD4P21917 467 aa15.54■□□□□ 0.08
UBE3D-204ENST00000430071 SMSP52788 366 aa15.54■□□□□ 0.08
UBE3D-204ENST00000430071 FBXW4P57775 412 aa15.54■□□□□ 0.08
UBE3D-204ENST00000430071 MRPS35P82673 323 aaKnown RBP15.54■□□□□ 0.08
UBE3D-204ENST00000430071 RPS6KA2Q15349 733 aa15.54■□□□□ 0.08
UBE3D-204ENST00000430071 PGS1Q32NB8 556 aa15.54■□□□□ 0.08
UBE3D-204ENST00000430071 TRMT12Q53H54 448 aaKnown RBP15.54■□□□□ 0.08
UBE3D-204ENST00000430071 ARHGAP11AQ6P4F7 1023 aa15.54■□□□□ 0.08
UBE3D-204ENST00000430071 TRILQ7L0X0 811 aa15.54■□□□□ 0.08
UBE3D-204ENST00000430071 SLC22A16Q86VW1 577 aa15.54■□□□□ 0.08
UBE3D-204ENST00000430071 MCEMP1Q8IX19 187 aa15.54■□□□□ 0.08
UBE3D-204ENST00000430071 VWA5B2Q8N398 1253 aa15.54■□□□□ 0.08
UBE3D-204ENST00000430071 SLC15A4Q8N697 577 aa15.54■□□□□ 0.08
UBE3D-204ENST00000430071 KAT2AQ92830 837 aa15.54■□□□□ 0.08
UBE3D-204ENST00000430071 TESCQ96BS2 214 aa15.54■□□□□ 0.08
UBE3D-204ENST00000430071 SDCCAG3Q96C92 435 aa15.54■□□□□ 0.08
UBE3D-204ENST00000430071 CTHRC1Q96CG8 243 aa15.54■□□□□ 0.08
UBE3D-204ENST00000430071 RILPQ96NA2 401 aa15.54■□□□□ 0.08
UBE3D-204ENST00000430071 OR10A5Q9H207 317 aa15.54■□□□□ 0.08
UBE3D-204ENST00000430071 ZNF639Q9UID6 485 aa15.54■□□□□ 0.08
UBE3D-204ENST00000430071 AKAP6Q13023 2319 aa15.54■□□□□ 0.08
UBE3D-204ENST00000430071 SPG11Q96JI7 2443 aa15.54■□□□□ 0.08
UBE3D-204ENST00000430071 CSMD2Q7Z408 3487 aa15.53■□□□□ 0.08
UBE3D-204ENST00000430071 IGHG3P01860 377 aa15.53■□□□□ 0.08
UBE3D-204ENST00000430071 GPX3P22352 226 aa15.53■□□□□ 0.08
UBE3D-204ENST00000430071 ZFP36L2P47974 494 aaKnown RBP15.53■□□□□ 0.08
UBE3D-204ENST00000430071 ARFIP2P53365 341 aa15.53■□□□□ 0.08
UBE3D-204ENST00000430071 CLNS1AP54105 237 aaKnown RBP15.53■□□□□ 0.08
UBE3D-204ENST00000430071 WNT3P56703 355 aa15.53■□□□□ 0.08
UBE3D-204ENST00000430071 PHC1P78364 1004 aa15.53■□□□□ 0.08
UBE3D-204ENST00000430071 NNATQ16517 81 aa15.53■□□□□ 0.08
UBE3D-204ENST00000430071 NTRK2Q16620 822 aa15.53■□□□□ 0.08
UBE3D-204ENST00000430071 HYAL4Q2M3T9 481 aa15.53■□□□□ 0.08
UBE3D-204ENST00000430071 GXYLT1Q4G148 440 aa15.53■□□□□ 0.08
UBE3D-204ENST00000430071 SPANXN4Q5MJ08 99 aa15.53■□□□□ 0.08
UBE3D-204ENST00000430071 RTL6Q6ICC9 239 aa15.53■□□□□ 0.08
UBE3D-204ENST00000430071 OR4F3Q6IEY1 312 aa15.53■□□□□ 0.08
UBE3D-204ENST00000430071 FAM109AQ8N4B1 249 aa15.53■□□□□ 0.08
UBE3D-204ENST00000430071 OR9I1Q8NGQ6 314 aa15.53■□□□□ 0.08
UBE3D-204ENST00000430071 ZNF675Q8TD23 568 aa15.53■□□□□ 0.08
UBE3D-204ENST00000430071 PHF10Q8WUB8 498 aaKnown RBP15.53■□□□□ 0.08
UBE3D-204ENST00000430071 PRPF18Q99633 342 aaKnown RBP15.53■□□□□ 0.08
UBE3D-204ENST00000430071 DUSP26Q9BV47 211 aa15.53■□□□□ 0.08
UBE3D-204ENST00000430071 BHLHE41Q9C0J9 482 aaPredicted RBP15.53■□□□□ 0.08
UBE3D-204ENST00000430071 NXF5Q9H1B4 397 aaKnown RBP15.53■□□□□ 0.08
UBE3D-204ENST00000430071 ACSS1Q9NUB1 689 aaPredicted RBP15.53■□□□□ 0.08
UBE3D-204ENST00000430071 ATAD3AQ9NVI7 634 aa15.53■□□□□ 0.08
UBE3D-204ENST00000430071 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.53■□□□□ 0.08
UBE3D-204ENST00000430071 ZIM2Q9NZV7 527 aa15.53■□□□□ 0.08
UBE3D-204ENST00000430071 KLHL14Q9P2G3 628 aa15.53■□□□□ 0.08
UBE3D-204ENST00000430071 SPRR3Q9UBC9 169 aa15.53■□□□□ 0.08
UBE3D-204ENST00000430071 MAPRE3Q9UPY8 281 aa15.53■□□□□ 0.08
UBE3D-204ENST00000430071 TEP1Q99973 2627 aaKnown RBP15.53■□□□□ 0.08
UBE3D-204ENST00000430071 CCDC168Q8NDH2 2452 aa15.52■□□□□ 0.08
UBE3D-204ENST00000430071 GMNCA6NCL1 334 aa15.52■□□□□ 0.08
UBE3D-204ENST00000430071 OR6C76A6NM76 312 aa15.52■□□□□ 0.08
UBE3D-204ENST00000430071 ACOT7O00154 380 aa15.52■□□□□ 0.08
UBE3D-204ENST00000430071 SLC22A3O75751 556 aa15.52■□□□□ 0.08
UBE3D-204ENST00000430071 CBX7O95931 251 aa15.52■□□□□ 0.08
UBE3D-204ENST00000430071 AGAP20933 346 aa15.52■□□□□ 0.08
UBE3D-204ENST00000430071 MRPL19P49406 292 aaKnown RBP15.52■□□□□ 0.08
UBE3D-204ENST00000430071 CDK9P50750 372 aaKnown RBP15.52■□□□□ 0.08
UBE3D-204ENST00000430071 DGKQP52824 942 aa15.52■□□□□ 0.08
UBE3D-204ENST00000430071 NUP107P57740 925 aa15.52■□□□□ 0.08
UBE3D-204ENST00000430071 HSPB3Q12988 150 aa15.52■□□□□ 0.08
UBE3D-204ENST00000430071 FAM174BQ3ZCQ3 159 aa15.52■□□□□ 0.08
UBE3D-204ENST00000430071 C6orf163Q5TEZ5 329 aa15.52■□□□□ 0.08
UBE3D-204ENST00000430071 PAOXQ6QHF9 649 aa15.52■□□□□ 0.08
UBE3D-204ENST00000430071 CCDC71Q8IV32 467 aaPredicted RBP15.52■□□□□ 0.08
UBE3D-204ENST00000430071 ZNF295-AS1Q8N0V1 137 aa15.52■□□□□ 0.08
UBE3D-204ENST00000430071 MIER2Q8N344 545 aa15.52■□□□□ 0.08
UBE3D-204ENST00000430071 FBXW8Q8N3Y1 598 aa15.52■□□□□ 0.08
UBE3D-204ENST00000430071 OR7G2Q8NG99 324 aa15.52■□□□□ 0.08
UBE3D-204ENST00000430071 OR8J2Q8NGG1 315 aa15.52■□□□□ 0.08
UBE3D-204ENST00000430071 C10orf82Q8WW14 230 aa15.52■□□□□ 0.08
UBE3D-204ENST00000430071 ZBED6CLQ96FA7 236 aaPredicted RBP15.52■□□□□ 0.08
UBE3D-204ENST00000430071 UCK2Q9BZX2 261 aa15.52■□□□□ 0.08
UBE3D-204ENST00000430071 FAM107BQ9H098 131 aa15.52■□□□□ 0.08
UBE3D-204ENST00000430071 SLC6A15Q9H2J7 730 aa15.52■□□□□ 0.08
UBE3D-204ENST00000430071 ZNF385DQ9H6B1 395 aa15.52■□□□□ 0.08
UBE3D-204ENST00000430071 NPFFR2Q9Y5X5 522 aa15.52■□□□□ 0.08
UBE3D-204ENST00000430071 A0A1B0GVC2 190 aa15.51■□□□□ 0.07
UBE3D-204ENST00000430071 A0A1W2PRB8 838 aa15.51■□□□□ 0.07
UBE3D-204ENST00000430071 SCN2BO60939 215 aa15.51■□□□□ 0.07
UBE3D-204ENST00000430071 DDX5P17844 614 aaKnown RBP15.51■□□□□ 0.07
UBE3D-204ENST00000430071 NCF2P19878 526 aaPredicted RBP15.51■□□□□ 0.07
UBE3D-204ENST00000430071 MC3RP41968 323 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms