RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 FABP9Q0Z7S8 132 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 CPSF6Q16630 551 aaKnown RBP eCLIP13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 XKR7Q5GH72 579 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 FAM74A1Q5RGS3 127 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 ATAT1Q5SQI0 421 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 LAIR2Q6ISS4 152 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 SERPINA9Q86WD7 417 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 DCBLD1Q8N8Z6 715 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 STOML3Q8TAV4 291 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 GTPBP3Q969Y2 492 aaKnown RBP13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 MAP3K3Q99759 626 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 FBP1P09467 338 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 IGFBP6P24592 240 aaPredicted RBP13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 GIFP27352 417 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 SERPINA4P29622 427 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 VIPR1P32241 457 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 SNRPD1P62314 119 aaKnown RBP13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 RPS24P62847 133 aaKnown RBP13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 GPR176Q14439 515 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 CDNFQ49AH0 187 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 KRBOX4Q5JUW0 171 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 RPL13AP3Q6NVV1 102 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 C12orf40Q86WS4 652 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 MCATQ8IVS2 390 aaKnown RBP13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 OR4K3Q96R72 315 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 MGME1Q9BQP7 344 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 DCAF13Q9NV06 445 aaKnown RBP13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 BTBD17A6NE02 478 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 NEDD8-MDP1E9PL57 170 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 SLC31A2O15432 143 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 COCHO43405 550 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 PRSS23O95084 383 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 FARS2O95363 451 aaKnown RBP13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 CRYBA1P05813 215 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 HBQ1P09105 142 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 GGT2P36268 569 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 IRF8Q02556 426 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 MLLT1Q03111 559 aaPredicted RBP13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 Q6ZPB1 254 aaPredicted RBP13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 LRRC70Q7Z2Q7 622 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 IGSF8Q969P0 613 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 PDLIM5Q96HC4 596 aaKnown RBP13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 TM6SF2Q9BZW4 377 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 ZFYVE1Q9HBF4 777 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 TMEFF2Q9UIK5 374 aaPredicted RBP13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 KCNIP3Q9Y2W7 256 aa13.65□□□□□ -0.22
SYNGAP1-203ENST00000428982 CASP8AP2Q9UKL3 1982 aa13.65□□□□□ -0.23
SYNGAP1-203ENST00000428982 MPTX1A8MV57 137 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 STK25O00506 426 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 KLK3P07288 261 aaPredicted RBP13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 C8GP07360 202 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 PRPS1L1P21108 318 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 GCGRP47871 477 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 P2RY4P51582 365 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 ZNF140P52738 457 aaPredicted RBP13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 ERVPABLB-1P60509 514 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 CAP1Q01518 475 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 PTPRRQ15256 657 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 SPANXN4Q5MJ08 99 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 KIAA0907Q7Z7F0 614 aaPredicted RBP13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 PROKR1Q8TCW9 393 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 SH3RF2Q8TEC5 729 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 GLYATL2Q8WU03 294 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 HS6ST2Q96MM7 605 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 CDK15Q96Q40 435 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 HBEGFQ99075 208 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 COMMD9Q9P000 198 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 OARD1Q9Y530 152 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 PCDHGC4Q9Y5F7 938 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 TGM5O43548 720 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 TMEM173Q86WV6 379 aaPredicted RBP13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 MARCH9Q86YJ5 346 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 PHOSPHO1Q8TCT1 267 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 CREB3L4Q8TEY5 395 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 TSSK3Q96PN8 268 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 UTS2RQ9UKP6 389 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 RPL36Q9Y3U8 105 aaKnown RBP13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 SPAM1P38567 509 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 ALG11Q2TAA5 492 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 PLAG1Q6DJT9 500 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 ARMC6Q6NXE6 501 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 TMEM207Q6UWW9 146 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 CBLN2Q8IUK8 224 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 SERPINA12Q8IW75 414 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 FOXRED2Q8IWF2 684 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 SLC25A46Q96AG3 418 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 ZC3HAV1LQ96H79 300 aaKnown RBP13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 COPS8Q99627 209 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 SLC38A1Q9H2H9 487 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 EQTNQ9NQ60 294 aa13.64□□□□□ -0.23
SYNGAP1-203ENST00000428982 TMEM82A0PJX8 343 aa13.63□□□□□ -0.23
SYNGAP1-203ENST00000428982 QSOX1O00391 747 aa13.63□□□□□ -0.23
SYNGAP1-203ENST00000428982 RAB3DO95716 219 aa13.63□□□□□ -0.23
SYNGAP1-203ENST00000428982 TCRBP04435 133 aa13.63□□□□□ -0.23
SYNGAP1-203ENST00000428982 MTHFD2P13995 350 aa13.63□□□□□ -0.23
SYNGAP1-203ENST00000428982 H3F3CQ6NXT2 135 aa13.63□□□□□ -0.23
SYNGAP1-203ENST00000428982 FAM151BQ6UXP7 276 aa13.63□□□□□ -0.23
SYNGAP1-203ENST00000428982 RBMS3Q6XE24 437 aaKnown RBP13.63□□□□□ -0.23
SYNGAP1-203ENST00000428982 CCDC71Q8IV32 467 aaPredicted RBP13.63□□□□□ -0.23
SYNGAP1-203ENST00000428982 TNFAIP8L1Q8WVP5 186 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms