RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 KRBOX1C9JBD0 128 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 SLC30A4O14863 429 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 TAPBPO15533 448 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 ORC5O43913 435 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 FAM157BP0CG42 384 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 TYRP1P17643 537 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 PTBP1P26599 531 aaKnown RBP eCLIP10.74□□□□□ -0.69
CECR3-201ENST00000428828 ALDH9A1P49189 494 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 RORCP51449 518 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 PNLIPRP1P54315 467 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 TBPL1P62380 186 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 DAB2P98082 770 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 NHLH1Q02575 133 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 NAE1Q13564 534 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 IGSF11Q5DX21 431 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 XKR7Q5GH72 579 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 SAXO2Q658L1 398 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 OGFOD3Q6PK18 319 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 ENPP6Q6UWR7 440 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 ASCL5Q7RTU5 278 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 OVCH2Q7RTZ1 564 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 CDH26Q8IXH8 852 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 SAMD14Q8IZD0 417 aaPredicted RBP10.74□□□□□ -0.69
CECR3-201ENST00000428828 FAM86B1Q8N7N1 296 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 FBXO15Q8NCQ5 510 aaPredicted RBP10.74□□□□□ -0.69
CECR3-201ENST00000428828 APH1BQ8WW43 257 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 INTS12Q96CB8 462 aaKnown RBP10.74□□□□□ -0.69
CECR3-201ENST00000428828 SLC38A3Q99624 504 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 TRIM8Q9BZR9 551 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 SRMSQ9H3Y6 488 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 TUBB1Q9H4B7 451 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 RIBC2Q9H4K1 309 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 FOLH1BQ9HBA9 442 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 EVA1BQ9NVM1 165 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 LRIT1Q9P2V4 623 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 UBQLN2Q9UHD9 624 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 U3KQV3 271 aa10.74□□□□□ -0.69
CECR3-201ENST00000428828 COL5A1P20908 1838 aaPredicted RBP10.74□□□□□ -0.69
CECR3-201ENST00000428828 C4orf47A7E2U8 309 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 WASHC1A8K0Z3 465 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 GSTA4O15217 222 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 SH3BP5O60239 455 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 LRP3O75074 770 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 WDR47O94967 919 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 SNAPINO95295 136 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 LDOC1O95751 146 aaPredicted RBP10.73□□□□□ -0.69
CECR3-201ENST00000428828 CSF3P09919 207 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 TSPAN8P19075 237 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 FPR1P21462 350 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 PSMB5P28074 263 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 MAP2K3P46734 347 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 FASLGP48023 281 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 RAB28P51157 221 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 DAPP51397 102 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 RAB14P61106 215 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 BTG1P62324 171 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 ERVK-8P63133 956 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 IL1RL1Q01638 556 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 NR0B2Q15466 257 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 MICAQ29983 383 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 ZXDCQ2QGD7 858 aaPredicted RBP10.73□□□□□ -0.69
CECR3-201ENST00000428828 PTCHD3Q3KNS1 767 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.73□□□□□ -0.69
CECR3-201ENST00000428828 LCN1P1Q5VSP4 162 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 ANKRD34AQ69YU3 496 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 RRM2BQ7LG56 351 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 P3H2Q8IVL5 708 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 PHC2Q8IXK0 858 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 DNAJC22Q8N4W6 341 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 LINC01555Q8NAE3 123 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 NLGN4YQ8NFZ3 816 aaPredicted RBP10.73□□□□□ -0.69
CECR3-201ENST00000428828 HRASLS5Q96KN8 279 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 WACQ9BTA9 647 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 MENTQ9BUN1 341 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 GABARAPL3Q9BY60 117 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 NT5DC2Q9H857 520 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 CMAHPQ9Y471 501 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 SPEGQ15772 3267 aa10.73□□□□□ -0.69
CECR3-201ENST00000428828 MDC1Q14676 2089 aaKnown RBP10.73□□□□□ -0.69
CECR3-201ENST00000428828 ELOVL7A1L3X0 281 aa10.72□□□□□ -0.69
CECR3-201ENST00000428828 GSAPA4D1B5 854 aa10.72□□□□□ -0.69
CECR3-201ENST00000428828 OR6C74A6NCV1 312 aa10.72□□□□□ -0.69
CECR3-201ENST00000428828 PLA2G10O15496 165 aa10.72□□□□□ -0.69
CECR3-201ENST00000428828 KLK8O60259 260 aa10.72□□□□□ -0.69
CECR3-201ENST00000428828 TNFRSF21O75509 655 aa10.72□□□□□ -0.69
CECR3-201ENST00000428828 SNAPC5O75971 98 aa10.72□□□□□ -0.69
CECR3-201ENST00000428828 ZNF883P0CG24 379 aa10.72□□□□□ -0.69
CECR3-201ENST00000428828 HK1P19367 917 aa10.72□□□□□ -0.69
CECR3-201ENST00000428828 PRKACGP22612 351 aa10.72□□□□□ -0.69
CECR3-201ENST00000428828 DNAJA1P31689 397 aaKnown RBP10.72□□□□□ -0.69
CECR3-201ENST00000428828 GRK6P43250 576 aa10.72□□□□□ -0.69
CECR3-201ENST00000428828 HNMTP50135 292 aa10.72□□□□□ -0.69
CECR3-201ENST00000428828 DGKQP52824 942 aa10.72□□□□□ -0.69
CECR3-201ENST00000428828 DIO3P55073 304 aa10.72□□□□□ -0.69
CECR3-201ENST00000428828 SMN1Q16637 294 aaKnown RBP10.72□□□□□ -0.69
CECR3-201ENST00000428828 ANKS6Q68DC2 871 aa10.72□□□□□ -0.69
CECR3-201ENST00000428828 GUSBP11Q6P575 273 aa10.72□□□□□ -0.69
CECR3-201ENST00000428828 ZNF704Q6ZNC4 412 aaPredicted RBP10.72□□□□□ -0.69
CECR3-201ENST00000428828 ATCAYQ86WG3 371 aa10.72□□□□□ -0.69
CECR3-201ENST00000428828 C17orf82Q86X59 251 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms