RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 AGPAT4Q9NRZ5 378 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 ASF1BQ9NVP2 202 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 NTMQ9P121 344 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 PRRC2CQ9Y520 2896 aaKnown RBP13.39□□□□□ -0.27
SGCE-204ENST00000428696 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 A0A0G2JMM0 328 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 A0A1W2PPB8 328 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 A0A1W2PRS3 328 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 KIR3DP1A8MWS1 328 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 ANGPT2O15123 496 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 TO15178 435 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 UGT2B11O75310 529 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 PSMG1O95456 288 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 SNRPB2P08579 225 aaKnown RBP13.39□□□□□ -0.27
SGCE-204ENST00000428696 KRT16P08779 473 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 IFI6P09912 130 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 ZFP36L2P47974 494 aaKnown RBP13.39□□□□□ -0.27
SGCE-204ENST00000428696 IRX1P78414 480 aaPredicted RBP13.39□□□□□ -0.27
SGCE-204ENST00000428696 MRPS22P82650 360 aaKnown RBP13.39□□□□□ -0.27
SGCE-204ENST00000428696 TLE1Q04724 770 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 IGFBP7Q16270 282 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 NTRK2Q16620 822 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 CCNJQ5T5M9 372 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 TNFAIP8L2Q6P589 184 aaPredicted RBP13.39□□□□□ -0.27
SGCE-204ENST00000428696 ZCCHC12Q6PEW1 402 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 C10orf82Q8WW14 230 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 XAGE5Q8WWM1 108 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 STON2Q8WXE9 905 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 TMCO6Q96DC7 493 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 GIMAP5Q96F15 307 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 SLC35A4Q96G79 324 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 SMG1Q96Q15 3661 aaKnown RBP13.39□□□□□ -0.27
SGCE-204ENST00000428696 OR7D2Q96RA2 312 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 FAM173AQ9BQD7 235 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 DOHHQ9BU89 302 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 IL1RL2Q9HB29 575 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 SAR1AQ9NR31 198 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 GPATCH2Q9NW75 528 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 KLRF1Q9NZS2 232 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 CNIH4Q9P003 139 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 ARMCX1Q9P291 453 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 PCDHGB3Q9Y5G1 929 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 LOC100653049A0A140TA62 436 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 TTC36A6NLP5 189 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 FAM166BA8MTA8 275 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 PYCARD-AS1I3L0S3 204 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 KRT34O76011 436 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 SORBS2O94875 1100 aaKnown RBP13.38□□□□□ -0.27
SGCE-204ENST00000428696 CRYABP02511 175 aaKnown RBP13.38□□□□□ -0.27
SGCE-204ENST00000428696 C1QCP02747 245 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 NAGAP17050 411 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 CAPN3P20807 821 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 ATP6V1C1P21283 382 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 MASP1P48740 699 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 PSMD4P55036 377 aaKnown RBP13.38□□□□□ -0.27
SGCE-204ENST00000428696 POU6F2P78424 691 aaPredicted RBP13.38□□□□□ -0.27
SGCE-204ENST00000428696 ALDH6A1Q02252 535 aaKnown RBP13.38□□□□□ -0.27
SGCE-204ENST00000428696 EFR3AQ14156 821 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 RCAN2Q14206 197 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 TOMM20Q15388 145 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 ATAD3BQ5T9A4 648 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 RPUSD3Q6P087 351 aaKnown RBP13.38□□□□□ -0.27
SGCE-204ENST00000428696 CDC73Q6P1J9 531 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 C16orf62Q7Z3J2 963 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 RNF130Q86XS8 419 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 OR2M7Q8NG81 312 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 SPPL2AQ8TCT8 520 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 PAQR8Q8TEZ7 354 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 RAB8BQ92930 207 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 TAAR6Q96RI8 345 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 NODALQ96S42 347 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 OR51I1Q9H343 314 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 PIGUQ9H490 435 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 SLC6A13Q9NSD5 602 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 DEPPQ9NTK1 212 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 GIN1Q9NXP7 522 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 NTNG1Q9Y2I2 539 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 NDUFAF1Q9Y375 327 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 CHCHD2Q9Y6H1 151 aaPredicted RBP13.38□□□□□ -0.27
SGCE-204ENST00000428696 KCNE3Q9Y6H6 103 aa13.38□□□□□ -0.27
SGCE-204ENST00000428696 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.38□□□□□ -0.27
SGCE-204ENST00000428696 A0A1W2PP18 115 aa13.37□□□□□ -0.27
SGCE-204ENST00000428696 PINLYPA6NC86 204 aa13.37□□□□□ -0.27
SGCE-204ENST00000428696 OR6C70A6NIJ9 312 aa13.37□□□□□ -0.27
SGCE-204ENST00000428696 NPIPA5E9PKD4 350 aa13.37□□□□□ -0.27
SGCE-204ENST00000428696 CCDC22O60826 627 aa13.37□□□□□ -0.27
SGCE-204ENST00000428696 PDE9AO76083 593 aa13.37□□□□□ -0.27
SGCE-204ENST00000428696 KCNK2O95069 426 aa13.37□□□□□ -0.27
SGCE-204ENST00000428696 NKX2-2O95096 273 aa13.37□□□□□ -0.27
SGCE-204ENST00000428696 KRT75O95678 551 aa13.37□□□□□ -0.27
SGCE-204ENST00000428696 OR12D1P0DN82 309 aa13.37□□□□□ -0.27
SGCE-204ENST00000428696 CYP4B1P13584 511 aa13.37□□□□□ -0.27
SGCE-204ENST00000428696 HPGDP15428 266 aa13.37□□□□□ -0.27
SGCE-204ENST00000428696 CRATP43155 626 aa13.37□□□□□ -0.27
SGCE-204ENST00000428696 TRPC1P48995 793 aa13.37□□□□□ -0.27
SGCE-204ENST00000428696 PPIAP62937 165 aaKnown RBP13.37□□□□□ -0.27
SGCE-204ENST00000428696 KLF10Q13118 480 aa13.37□□□□□ -0.27
SGCE-204ENST00000428696 MMEL1Q495T6 779 aa13.37□□□□□ -0.27
SGCE-204ENST00000428696 GTDC1Q4AE62 458 aa13.37□□□□□ -0.27
SGCE-204ENST00000428696 PAGE3Q5JUK9 113 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms