RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 EXOSC8Q96B26 276 aaKnown RBP8.37□□□□□ -1.07
SMC1A-203ENST00000428014 OMA1Q96E52 524 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 MAELQ96JY0 434 aaKnown RBP8.37□□□□□ -1.07
SMC1A-203ENST00000428014 EGLN2Q96KS0 407 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 ZFP3Q96NJ6 502 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 MS4A4EQ96PG1 132 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 SORT1Q99523 831 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 SH3GL2Q99962 352 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 TREX2Q9BQ50 279 aaPredicted RBP8.37□□□□□ -1.07
SMC1A-203ENST00000428014 EBPLQ9BY08 206 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 FOLH1BQ9HBA9 442 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 SDHAF3Q9NRP4 125 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 FAM120CQ9NX05 1096 aaKnown RBP8.37□□□□□ -1.07
SMC1A-203ENST00000428014 TUBA8Q9NY65 449 aaPredicted RBP8.37□□□□□ -1.07
SMC1A-203ENST00000428014 NKIRAS1Q9NYS0 192 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 PLEKHB1Q9UF11 243 aaPredicted RBP8.37□□□□□ -1.07
SMC1A-203ENST00000428014 C15orf41Q9Y2V0 281 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 CACNA1CQ13936 2221 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 TRGV5A0A0B4J1U4 118 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 TRGV8A0A0C4DH27 118 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 A0A1W2PQD3 144 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 DUXAA6NLW8 204 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 CCL21O00585 134 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 ADAM10O14672 748 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 EMC8O43402 210 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 TGDSO95455 350 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 IL33O95760 270 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 AK1P00568 194 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 CPN1P15169 458 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 MSX1P28360 303 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 PTPN6P29350 595 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 SRD5A2P31213 254 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 PTGDSP41222 190 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 MAN2A2P49641 1150 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 PRIM2P49643 509 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 DIO3P55073 304 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 MANFP55145 182 aaKnown RBP8.36□□□□□ -1.07
SMC1A-203ENST00000428014 WDR4P57081 412 aaKnown RBP8.36□□□□□ -1.07
SMC1A-203ENST00000428014 MRPS35P82673 323 aaKnown RBP8.36□□□□□ -1.07
SMC1A-203ENST00000428014 BTKQ06187 659 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 BST1Q10588 318 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 C3AR1Q16581 482 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 WLSQ5T9L3 541 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 CPTPQ5TA50 214 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 HHATQ5VTY9 493 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 C1QL3Q5VWW1 255 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 C16orf47Q6ZP98 133 aaPredicted RBP8.36□□□□□ -1.07
SMC1A-203ENST00000428014 LARP4Q71RC2 724 aaKnown RBP eCLIP8.36□□□□□ -1.07
SMC1A-203ENST00000428014 SPATA19Q7Z5L4 167 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 FGD2Q7Z6J4 655 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 MMP21Q8N119 569 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 AMER2Q8N7J2 671 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 FNDC5Q8NAU1 212 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 FAM13CQ8NE31 585 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 OR56A1Q8NGH5 318 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 OR52N2Q8NGI0 321 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 FAM110BQ8TC76 370 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 MIPOL1Q8TD10 442 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 ITLN2Q8WWU7 325 aaPredicted RBP8.36□□□□□ -1.07
SMC1A-203ENST00000428014 TUBGCP3Q96CW5 907 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 CCDC120Q96HB5 630 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 RILPQ96NA2 401 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 G6PC3Q9BUM1 346 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 OSBPL11Q9BXB4 747 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 OR2B2Q9GZK3 357 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 PRDM14Q9GZV8 571 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 LIN28AQ9H9Z2 209 aaKnown RBP8.36□□□□□ -1.07
SMC1A-203ENST00000428014 CBLCQ9ULV8 474 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 DTX4Q9Y2E6 619 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 WIF1Q9Y5W5 379 aa8.36□□□□□ -1.07
SMC1A-203ENST00000428014 EML6Q6ZMW3 1958 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 UQCRHLA0A096LP55 91 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 A0A1B0GTH9 108 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 MYOCOSA0A1B0GUC4 107 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 PINLYPA6NC86 204 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 PRAMEF25A6NGN4 478 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 HMGB1P1B2RPK0 211 aaPredicted RBP8.35□□□□□ -1.07
SMC1A-203ENST00000428014 TMEM233B4DJY2 109 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 ALG1L2C9J202 215 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 PYCARD-AS1I3L0S3 204 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 ANKRD28O15084 1053 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 SIAH2O43255 324 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 ICOSLGO75144 302 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 UGT2B11O75310 529 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 KCNH1O95259 989 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 AGR2O95994 175 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 JUNP05412 331 aaKnown RBP8.35□□□□□ -1.07
SMC1A-203ENST00000428014 ESRRAP11474 423 aaPredicted RBP8.35□□□□□ -1.07
SMC1A-203ENST00000428014 H2AFXP16104 143 aaPredicted RBP8.35□□□□□ -1.07
SMC1A-203ENST00000428014 LBPP18428 481 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 CHMP24386 653 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 ACVR2AP27037 513 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 IL12BP29460 328 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 PTGER1P34995 402 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 TIMP3P35625 211 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 MC3RP41968 323 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 MAGEA5P43359 124 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 DNASE1L1P49184 302 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 CLK3P49761 638 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms