RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 GIFP27352 417 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 ABCD3P28288 659 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 CBSP35520 551 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 GPX4P36969 197 aaPredicted RBP5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 PNPLA4P41247 253 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 AVPR1BP47901 424 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 DGKGP49619 791 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 TTPAP49638 278 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 MECP2P51608 486 aaKnown RBP5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 CCR9P51686 369 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 XKP51811 444 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 HMGA2P52926 109 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 ATXN1P54253 815 aaKnown RBP5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 HSD17B7P56937 341 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 SLC26A5P58743 744 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 SNRPEP62304 92 aaKnown RBP5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 RAB1AP62820 205 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 SELENOWP63302 87 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 DSC2Q02487 901 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 TMEM132DQ14C87 1099 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 KIAA0040Q15053 153 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 SEC23BQ15437 767 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 SF1Q15637 639 aaKnown RBP5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 KCNA10Q16322 511 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 MAPK14Q16539 360 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 ZNF630Q2M218 657 aaPredicted RBP5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 NDUFAF6Q330K2 333 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 SOWAHCQ53LP3 525 aaPredicted RBP5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 RAB41Q5JT25 222 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 FAM46CQ5VWP2 391 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 ZNF626Q68DY1 528 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 PTRHD1Q6GMV3 140 aaKnown RBP5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 LAIR1Q6GTX8 287 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 FRMPD2BQ6IN97 320 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 TRIM40Q6P9F5 258 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 C11orf88Q6PI97 169 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 SLC36A4Q6YBV0 504 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 GLDNQ6ZMI3 551 aaPredicted RBP5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 ASB18Q6ZVZ8 466 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 NDUFAF7Q7L592 441 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 SLC16A13Q7RTY0 426 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 MILR1Q7Z6M3 343 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 TMPRSS11BQ86T26 416 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 NAA40Q86UY6 237 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 CD163Q86VB7 1156 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 ANGPTL5Q86XS5 388 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 C1QL4Q86Z23 238 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 MISPQ8IVT2 679 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 MFSD6LQ8IWD5 586 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 GPR65Q8IYL9 337 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 OR4N4Q8N0Y3 316 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 CARFQ8N187 725 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 COMMD1Q8N668 190 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 SLC5A8Q8N695 610 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 ACVR1CQ8NER5 493 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 TMEM185AQ8NFB2 350 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 UBA3Q8TBC4 463 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 GTF3C2Q8WUA4 911 aaPredicted RBP5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 SLC35F5Q8WV83 523 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 RNF141Q8WVD5 230 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 GATAD2BQ8WXI9 593 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 PHYHIPQ92561 330 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 TMEM203Q969S6 136 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 TADA1Q96BN2 335 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 R3HDM4Q96D70 268 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 SMARCD1Q96GM5 515 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 TPD52L3Q96J77 140 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 ASB16Q96NS5 453 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 HHIPQ96QV1 700 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 PANX1Q96RD7 426 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 TAAR9Q96RI9 348 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 P2RX7Q99572 595 aaKnown RBP5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 SEPT5Q99719 369 aaPredicted RBP5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 MGME1Q9BQP7 344 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 RHNO1Q9BSD3 238 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 FUZQ9BT04 418 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 AARSD1Q9BTE6 412 aaKnown RBP5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 TSSK6Q9BXA6 273 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 EGLN1Q9GZT9 426 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 MS4A7Q9GZW8 240 aaPredicted RBP5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 MFFQ9GZY8 342 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 TKTL2Q9H0I9 626 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 WNT5BQ9H1J7 359 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 SLC25A51Q9H1U9 297 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 NSUN3Q9H649 340 aaKnown RBP5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 ELAC1Q9H777 363 aaKnown RBP5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 ZNF408Q9H9D4 720 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 PLEKHA1Q9HB21 404 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 LTB4R2Q9NPC1 389 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 B3GAT2Q9NPZ5 323 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 MMP26Q9NRE1 261 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 INPP5EQ9NRR6 644 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 ACSS1Q9NUB1 689 aaPredicted RBP5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 RNF19AQ9NV58 838 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 VSX1Q9NZR4 365 aaPredicted RBP5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 FLRT1Q9NZU1 646 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 SLAMF8Q9P0V8 285 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 ZNF69Q9UC07 566 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 ZNF282Q9UDV7 671 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms