RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 SAP130Q9H0E3 1048 aa24.77■■□□□ 1.56
SH3GL3-202ENST00000427482 CPED1A4D0V7 1026 aa24.77■■□□□ 1.56
SH3GL3-202ENST00000427482 TMEM221A6NGB7 291 aa24.77■■□□□ 1.56
SH3GL3-202ENST00000427482 M0R296 226 aa24.77■■□□□ 1.56
SH3GL3-202ENST00000427482 TOX3O15405 576 aaPredicted RBP24.77■■□□□ 1.56
SH3GL3-202ENST00000427482 STX11O75558 287 aa24.77■■□□□ 1.56
SH3GL3-202ENST00000427482 NKX2-2O95096 273 aa24.77■■□□□ 1.56
SH3GL3-202ENST00000427482 FOXD4Q12950 439 aaPredicted RBP24.77■■□□□ 1.56
SH3GL3-202ENST00000427482 CDK5R2Q13319 367 aa24.77■■□□□ 1.56
SH3GL3-202ENST00000427482 TOP3AQ13472 1001 aaPredicted RBP24.77■■□□□ 1.56
SH3GL3-202ENST00000427482 SEC23BQ15437 767 aa24.77■■□□□ 1.56
SH3GL3-202ENST00000427482 GPR135Q8IZ08 494 aa24.77■■□□□ 1.56
SH3GL3-202ENST00000427482 ZNF619Q8N2I2 560 aa24.77■■□□□ 1.56
SH3GL3-202ENST00000427482 LMF2Q9BU23 707 aaKnown RBP24.77■■□□□ 1.56
SH3GL3-202ENST00000427482 CAPN10Q9HC96 672 aa24.77■■□□□ 1.56
SH3GL3-202ENST00000427482 GPR55Q9Y2T6 319 aaPredicted RBP24.77■■□□□ 1.56
SH3GL3-202ENST00000427482 A0A1W2PRQ8 180 aa24.76■■□□□ 1.55
SH3GL3-202ENST00000427482 OR2W5A6NFC9 320 aa24.76■■□□□ 1.55
SH3GL3-202ENST00000427482 HYAL3O43820 417 aaPredicted RBP24.76■■□□□ 1.55
SH3GL3-202ENST00000427482 DGCR6Q14129 220 aa24.76■■□□□ 1.55
SH3GL3-202ENST00000427482 MED25Q71SY5 747 aa24.76■■□□□ 1.55
SH3GL3-202ENST00000427482 PARP8Q8N3A8 854 aa24.76■■□□□ 1.55
SH3GL3-202ENST00000427482 DTWD2Q8NBA8 298 aa24.76■■□□□ 1.55
SH3GL3-202ENST00000427482 FNDC11Q9BVV2 318 aa24.76■■□□□ 1.55
SH3GL3-202ENST00000427482 CACYBPQ9HB71 228 aaKnown RBP24.76■■□□□ 1.55
SH3GL3-202ENST00000427482 LANCL2Q9NS86 450 aa24.76■■□□□ 1.55
SH3GL3-202ENST00000427482 KLHL28Q9NXS3 571 aa24.76■■□□□ 1.55
SH3GL3-202ENST00000427482 NDOR1Q9UHB4 597 aa24.76■■□□□ 1.55
SH3GL3-202ENST00000427482 SOX30O94993 753 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 OR6B1O95007 311 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 GASTP01350 101 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 THBS1P07996 1170 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 AGXTP21549 392 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 RPS4Y1P22090 263 aaKnown RBP24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 ALAS2P22557 587 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 GABRA3P34903 492 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 OR1D4P47884 311 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 EMDP50402 254 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 NUP107P57740 925 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 POU6F2P78424 691 aaPredicted RBP24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 TMPRSS9Q7Z410 1059 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 CCDC71Q8IV32 467 aaPredicted RBP24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 CNIH3Q8TBE1 160 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 GTPBP3Q969Y2 492 aaKnown RBP24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 ZNF501Q96CX3 271 aaPredicted RBP24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 NDC1Q9BTX1 674 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 FOLH1BQ9HBA9 442 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 NECTIN3Q9NQS3 549 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 MAN2C1Q9NTJ4 1040 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 DHCR7Q9UBM7 475 aaKnown RBP24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 SERTAD3Q9UJW9 196 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 GMEB2Q9UKD1 530 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 ATXN7L1Q9ULK2 861 aaPredicted RBP24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 AGAP5A6NIR3 686 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 KIAA0513O60268 411 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 ADAP00813 363 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 GABARAPL2P60520 117 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 SERTAD2Q14140 314 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 LARS2Q15031 903 aaKnown RBP24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 ZNF773Q6PK81 442 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 ZNF574Q6ZN55 896 aaPredicted RBP24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 ZNF836Q6ZNA1 936 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 CLIP4Q8N3C7 705 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 CEP76Q8TAP6 659 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 SLC7A13Q8TCU3 470 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 NR4A3Q92570 626 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 ZNF566Q969W8 418 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 ZNF578Q96N58 590 aaPredicted RBP24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 PELOQ9BRX2 385 aaKnown RBP24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 ENOPH1Q9UHY7 261 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 BLOC1S6Q9UL45 172 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 CDC14AQ9UNH5 594 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 ZNF232Q9UNY5 417 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 PCDHGA6Q9Y5G7 932 aa24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 HEMK1Q9Y5R4 338 aaPredicted RBP24.75■■□□□ 1.55
SH3GL3-202ENST00000427482 ZDBF2Q9HCK1 2354 aa24.74■■□□□ 1.55
SH3GL3-202ENST00000427482 FER1L5A0AVI2 2057 aa24.74■■□□□ 1.55
SH3GL3-202ENST00000427482 GXYLT2A0PJZ3 443 aa24.74■■□□□ 1.55
SH3GL3-202ENST00000427482 SH3PXD2BA1X283 911 aa24.74■■□□□ 1.55
SH3GL3-202ENST00000427482 PATE3B3GLJ2 98 aa24.74■■□□□ 1.55
SH3GL3-202ENST00000427482 HRKO00198 91 aa24.74■■□□□ 1.55
SH3GL3-202ENST00000427482 SLC1A7O00341 560 aa24.74■■□□□ 1.55
SH3GL3-202ENST00000427482 POU2F1P14859 743 aa24.74■■□□□ 1.55
SH3GL3-202ENST00000427482 SSTR4P31391 388 aa24.74■■□□□ 1.55
SH3GL3-202ENST00000427482 GALNSP34059 522 aa24.74■■□□□ 1.55
SH3GL3-202ENST00000427482 BIKQ13323 160 aa24.74■■□□□ 1.55
SH3GL3-202ENST00000427482 GPR68Q15743 365 aa24.74■■□□□ 1.55
SH3GL3-202ENST00000427482 PRAMEF17Q5VTA0 474 aa24.74■■□□□ 1.55
SH3GL3-202ENST00000427482 YOD1Q5VVQ6 348 aaPredicted RBP24.74■■□□□ 1.55
SH3GL3-202ENST00000427482 RABEPKQ7Z6M1 372 aa24.74■■□□□ 1.55
SH3GL3-202ENST00000427482 ZDHHC19Q8WVZ1 309 aaPredicted RBP24.74■■□□□ 1.55
SH3GL3-202ENST00000427482 OR1F2PQ96R84 312 aa24.74■■□□□ 1.55
SH3GL3-202ENST00000427482 FGF21Q9NSA1 209 aa24.74■■□□□ 1.55
SH3GL3-202ENST00000427482 FBXO34Q9NWN3 711 aa24.74■■□□□ 1.55
SH3GL3-202ENST00000427482 MGAT4BQ9UQ53 548 aa24.74■■□□□ 1.55
SH3GL3-202ENST00000427482 MMACHCQ9Y4U1 282 aa24.74■■□□□ 1.55
SH3GL3-202ENST00000427482 DSCR3O14972 297 aa24.73■■□□□ 1.55
SH3GL3-202ENST00000427482 FRS3O43559 492 aa24.73■■□□□ 1.55
SH3GL3-202ENST00000427482 CNR2P34972 360 aa24.73■■□□□ 1.55
SH3GL3-202ENST00000427482 GGT2P36268 569 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms