RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 PPP4R1LQ9P1A2 415 aa12.69□□□□□ -0.38
HDAC6-206ENST00000426196 CHMP2BQ9UQN3 213 aa12.69□□□□□ -0.38
HDAC6-206ENST00000426196 PLLPQ9Y342 182 aa12.69□□□□□ -0.38
HDAC6-206ENST00000426196 ZNF337Q9Y3M9 751 aa12.69□□□□□ -0.38
HDAC6-206ENST00000426196 TSC22D4Q9Y3Q8 395 aa12.69□□□□□ -0.38
HDAC6-206ENST00000426196 K7EPI3 171 aa12.68□□□□□ -0.38
HDAC6-206ENST00000426196 SS18L1O75177 396 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-206ENST00000426196 GBAP04062 536 aa12.68□□□□□ -0.38
HDAC6-206ENST00000426196 CCDC166P0CW27 439 aa12.68□□□□□ -0.38
HDAC6-206ENST00000426196 IL11P20809 199 aa12.68□□□□□ -0.38
HDAC6-206ENST00000426196 PTMSP20962 102 aa12.68□□□□□ -0.38
HDAC6-206ENST00000426196 ATP6V0D1P61421 351 aa12.68□□□□□ -0.38
HDAC6-206ENST00000426196 MGAT5Q09328 741 aa12.68□□□□□ -0.38
HDAC6-206ENST00000426196 MAP4K2Q12851 820 aa12.68□□□□□ -0.38
HDAC6-206ENST00000426196 CUL3Q13618 768 aa12.68□□□□□ -0.38
HDAC6-206ENST00000426196 CTU2Q2VPK5 515 aaKnown RBP12.68□□□□□ -0.38
HDAC6-206ENST00000426196 HP1BP3Q5SSJ5 553 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-206ENST00000426196 STEAP4Q687X5 459 aa12.68□□□□□ -0.38
HDAC6-206ENST00000426196 FAM111BQ6SJ93 734 aa12.68□□□□□ -0.38
HDAC6-206ENST00000426196 DTX2Q86UW9 622 aa12.68□□□□□ -0.38
HDAC6-206ENST00000426196 ARIH2OSQ8N7S6 290 aa12.68□□□□□ -0.38
HDAC6-206ENST00000426196 KBTBD8Q8NFY9 601 aa12.68□□□□□ -0.38
HDAC6-206ENST00000426196 OR52R1Q8NGF1 315 aa12.68□□□□□ -0.38
HDAC6-206ENST00000426196 S100PBPQ96BU1 408 aa12.68□□□□□ -0.38
HDAC6-206ENST00000426196 RHOJQ9H4E5 214 aa12.68□□□□□ -0.38
HDAC6-206ENST00000426196 SMYD2Q9NRG4 433 aa12.68□□□□□ -0.38
HDAC6-206ENST00000426196 KCNS2Q9ULS6 477 aa12.68□□□□□ -0.38
HDAC6-206ENST00000426196 CLEC4AQ9UMR7 237 aa12.68□□□□□ -0.38
HDAC6-206ENST00000426196 OR2M5A3KFT3 312 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 ELOA3DA6NLF2 546 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-206ENST00000426196 B4DXG7 233 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 SIX3O95343 332 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-206ENST00000426196 ATP1B1P05026 303 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 CD1DP15813 335 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 IGFBP5P24593 272 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 ELK3P41970 407 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 MRPS22P82650 360 aaKnown RBP12.67□□□□□ -0.38
HDAC6-206ENST00000426196 POU4F1Q01851 419 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 ILF2Q12905 390 aaKnown RBP12.67□□□□□ -0.38
HDAC6-206ENST00000426196 SQLEQ14534 574 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 PPP1R7Q15435 360 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 ELOA3BQ3SY89 546 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 UBAP2Q5T6F2 1119 aaKnown RBP12.67□□□□□ -0.38
HDAC6-206ENST00000426196 FAM166AQ6J272 317 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 BHLHB9Q6PI77 547 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 C12orf54Q6X4T0 127 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 IL17RELQ6ZVW7 336 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 LARP4Q71RC2 724 aaKnown RBP eCLIP12.67□□□□□ -0.38
HDAC6-206ENST00000426196 PDIK1LQ8N165 341 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 FADS6Q8N9I5 356 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 ELOA3Q8NG57 546 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 TSPAN17Q96FV3 270 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 HDHD5Q9BXW7 423 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 DSN1Q9H410 356 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 PTGES2Q9H7Z7 377 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 CHODLQ9H9P2 273 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 NSMCE4AQ9NXX6 385 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 NUDT4Q9NZJ9 180 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 STOML1Q9UBI4 398 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 ASIC3Q9UHC3 531 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 ZNF639Q9UID6 485 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 ANGPTL3Q9Y5C1 460 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 AP4B1Q9Y6B7 739 aa12.67□□□□□ -0.38
HDAC6-206ENST00000426196 DNALI1O14645 258 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-206ENST00000426196 SCO2O43819 266 aa12.66□□□□□ -0.38
HDAC6-206ENST00000426196 TSPAN2O60636 221 aa12.66□□□□□ -0.38
HDAC6-206ENST00000426196 WISP3O95389 354 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-206ENST00000426196 CBX7O95931 251 aa12.66□□□□□ -0.38
HDAC6-206ENST00000426196 CD8AP01732 235 aa12.66□□□□□ -0.38
HDAC6-206ENST00000426196 IGHV4-31P0DP07 118 aa12.66□□□□□ -0.38
HDAC6-206ENST00000426196 IL32P24001 234 aa12.66□□□□□ -0.38
HDAC6-206ENST00000426196 EIF1AXP47813 144 aaKnown RBP12.66□□□□□ -0.38
HDAC6-206ENST00000426196 SLC6A8P48029 635 aa12.66□□□□□ -0.38
HDAC6-206ENST00000426196 GAS1P54826 345 aa12.66□□□□□ -0.38
HDAC6-206ENST00000426196 PSPHP78330 225 aa12.66□□□□□ -0.38
HDAC6-206ENST00000426196 BSPH1Q075Z2 132 aa12.66□□□□□ -0.38
HDAC6-206ENST00000426196 MGAT2Q10469 447 aa12.66□□□□□ -0.38
HDAC6-206ENST00000426196 FRG1Q14331 258 aaKnown RBP12.66□□□□□ -0.38
HDAC6-206ENST00000426196 AGAP6Q5VW22 663 aa12.66□□□□□ -0.38
HDAC6-206ENST00000426196 LIPJQ5W064 366 aa12.66□□□□□ -0.38
HDAC6-206ENST00000426196 MEX3DQ86XN8 651 aaKnown RBP12.66□□□□□ -0.38
HDAC6-206ENST00000426196 OR2M3Q8NG83 312 aa12.66□□□□□ -0.38
HDAC6-206ENST00000426196 OR5M1Q8NGP8 315 aa12.66□□□□□ -0.38
HDAC6-206ENST00000426196 UBTD2Q8WUN7 234 aa12.66□□□□□ -0.38
HDAC6-206ENST00000426196 BTBD9Q96Q07 612 aa12.66□□□□□ -0.38
HDAC6-206ENST00000426196 TRIM2Q9C040 744 aa12.66□□□□□ -0.38
HDAC6-206ENST00000426196 FOLH1BQ9HBA9 442 aa12.66□□□□□ -0.38
HDAC6-206ENST00000426196 ZBTB26Q9HCK0 441 aa12.66□□□□□ -0.38
HDAC6-206ENST00000426196 GLRX2Q9NS18 164 aa12.66□□□□□ -0.38
HDAC6-206ENST00000426196 CISD1Q9NZ45 108 aaKnown RBP12.66□□□□□ -0.38
HDAC6-206ENST00000426196 MCTS1Q9ULC4 181 aaKnown RBP12.66□□□□□ -0.38
HDAC6-206ENST00000426196 B3GALT5Q9Y2C3 310 aa12.66□□□□□ -0.38
HDAC6-206ENST00000426196 GPR55Q9Y2T6 319 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-206ENST00000426196 C17orf51A8MQB3 221 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 SUPT3HB4E1H0 165 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 H0YIV9 168 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 PHGDHO43175 533 aaKnown RBP12.65□□□□□ -0.38
HDAC6-206ENST00000426196 KCNAB3O43448 404 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 SUPT3HO75486 399 aa12.65□□□□□ -0.38
HDAC6-206ENST00000426196 ERAL1O75616 437 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms