RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 BRINP1O60477 761 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 GP1BAP07359 652 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 ANXA8P13928 327 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 FUT4P22083 530 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 SSTR4P31391 388 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 RHAGQ02094 409 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 IL18R1Q13478 541 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 GANABQ14697 944 aaKnown RBP14.13□□□□□ -0.15
ACTB-204ENST00000425660 EXOC3L2Q2M3D2 409 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 TCEAL6Q6IPX3 200 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 VRK2Q86Y07 508 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 PEX5LQ8IYB4 626 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 OFCC1Q8IZS5 231 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 ZNF619Q8N2I2 560 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 ZNF615Q8N8J6 731 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 ZNF555Q8NEP9 628 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 OR10G2Q8NGC3 310 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 OR6T1Q8NGN1 323 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 OR52J3Q8NH60 311 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 PHF10Q8WUB8 498 aaKnown RBP14.13□□□□□ -0.15
ACTB-204ENST00000425660 PIK3R3Q92569 461 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 TCEAL3Q969E4 200 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 CNDP2Q96KP4 475 aaKnown RBP14.13□□□□□ -0.15
ACTB-204ENST00000425660 OR6C1Q96RD1 312 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 GFM1Q96RP9 751 aaKnown RBP14.13□□□□□ -0.15
ACTB-204ENST00000425660 SCN2AQ99250 2005 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 FEVQ99581 238 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 TGIF2Q9GZN2 237 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 FOLH1BQ9HBA9 442 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 MKKSQ9NPJ1 570 aaPredicted RBP14.13□□□□□ -0.15
ACTB-204ENST00000425660 KIF17Q9P2E2 1029 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 IGLV3-12A0A075B6K2 115 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 A0A1W2PRQ8 180 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 TCRBV16S1A1N1A0A5B0 115 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 TRIM64A6NGJ6 449 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 A6NHS1 94 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 TTC36A6NLP5 189 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 H3BNH8 94 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 MITFO75030 526 aaPredicted RBP14.13□□□□□ -0.15
ACTB-204ENST00000425660 CLPSP04118 112 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 SMIM18P0DKX4 95 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 CDH2P19022 906 aaPredicted RBP14.13□□□□□ -0.15
ACTB-204ENST00000425660 GABRA3P34903 492 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 RPS6KA3P51812 740 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 POU6F2P78424 691 aaPredicted RBP14.13□□□□□ -0.15
ACTB-204ENST00000425660 ZNF155Q12901 538 aaPredicted RBP14.13□□□□□ -0.15
ACTB-204ENST00000425660 DGCR6Q14129 220 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 ZNF267Q14586 743 aaPredicted RBP14.13□□□□□ -0.15
ACTB-204ENST00000425660 ZNHIT3Q15649 155 aaPredicted RBP14.13□□□□□ -0.15
ACTB-204ENST00000425660 CCNJQ5T5M9 372 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 ARHGAP40Q5TG30 622 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 ZNF770Q6IQ21 691 aaPredicted RBP14.13□□□□□ -0.15
ACTB-204ENST00000425660 DEF8Q6ZN54 512 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 HMGN2P46Q86SG4 172 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 BPHLQ86WA6 291 aaPredicted RBP14.13□□□□□ -0.15
ACTB-204ENST00000425660 OR7G1Q8NGA0 311 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 VANGL1Q8TAA9 524 aaPredicted RBP14.13□□□□□ -0.15
ACTB-204ENST00000425660 PTPMT1Q8WUK0 201 aaPredicted RBP14.13□□□□□ -0.15
ACTB-204ENST00000425660 FUZQ9BT04 418 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 GABARAPL3Q9BY60 117 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 KRT84Q9NSB2 600 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 RARRES3Q9UL19 164 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 ZNF443Q9Y2A4 671 aaPredicted RBP14.13□□□□□ -0.15
ACTB-204ENST00000425660 MYRFQ9Y2G1 1151 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 HCN4Q9Y3Q4 1203 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 LNP1A1A4G5 178 aa14.12□□□□□ -0.15
ACTB-204ENST00000425660 SYNDIG1LA6NDD5 238 aa14.12□□□□□ -0.15
ACTB-204ENST00000425660 PCDH17O14917 1159 aa14.12□□□□□ -0.15
ACTB-204ENST00000425660 KCNK2O95069 426 aa14.12□□□□□ -0.15
ACTB-204ENST00000425660 ONECUT2O95948 504 aa14.12□□□□□ -0.15
ACTB-204ENST00000425660 IFNA16P05015 189 aa14.12□□□□□ -0.15
ACTB-204ENST00000425660 ACP1P24666 158 aa14.12□□□□□ -0.15
ACTB-204ENST00000425660 POLR2IP36954 125 aaKnown RBP14.12□□□□□ -0.15
ACTB-204ENST00000425660 EFNA3P52797 238 aa14.12□□□□□ -0.15
ACTB-204ENST00000425660 SMIM11AP58511 58 aa14.12□□□□□ -0.15
ACTB-204ENST00000425660 ZFP36L1Q07352 338 aaKnown RBP14.12□□□□□ -0.15
ACTB-204ENST00000425660 TRA2AQ13595 282 aaKnown RBP eCLIP14.12□□□□□ -0.15
ACTB-204ENST00000425660 KEAP1Q14145 624 aa14.12□□□□□ -0.15
ACTB-204ENST00000425660 LARS2Q15031 903 aaKnown RBP14.12□□□□□ -0.15
ACTB-204ENST00000425660 NPTX1Q15818 432 aa14.12□□□□□ -0.15
ACTB-204ENST00000425660 COX15Q7KZN9 410 aa14.12□□□□□ -0.15
ACTB-204ENST00000425660 SLC5A8Q8N695 610 aa14.12□□□□□ -0.15
ACTB-204ENST00000425660 C16orf52Q8NHV5 167 aa14.12□□□□□ -0.15
ACTB-204ENST00000425660 RMND5BQ96G75 393 aaPredicted RBP14.12□□□□□ -0.15
ACTB-204ENST00000425660 PRRC1Q96M27 445 aa14.12□□□□□ -0.15
ACTB-204ENST00000425660 ALPK1Q96QP1 1244 aa14.12□□□□□ -0.15
ACTB-204ENST00000425660 YIPF2Q9BWQ6 316 aa14.12□□□□□ -0.15
ACTB-204ENST00000425660 OR10A5Q9H207 317 aa14.12□□□□□ -0.15
ACTB-204ENST00000425660 SLC22A11Q9NSA0 550 aa14.12□□□□□ -0.15
ACTB-204ENST00000425660 ERVK-19Q9WJR5 959 aa14.12□□□□□ -0.15
ACTB-204ENST00000425660 DTX4Q9Y2E6 619 aa14.12□□□□□ -0.15
ACTB-204ENST00000425660 PCDHGA8Q9Y5G5 932 aa14.12□□□□□ -0.15
ACTB-204ENST00000425660 CCDC88CQ9P219 2028 aa14.12□□□□□ -0.15
ACTB-204ENST00000425660 C17orf105B2RV13 164 aa14.11□□□□□ -0.15
ACTB-204ENST00000425660 FLRT2O43155 660 aa14.11□□□□□ -0.15
ACTB-204ENST00000425660 UGT2B11O75310 529 aa14.11□□□□□ -0.15
ACTB-204ENST00000425660 SMNDC1O75940 238 aaKnown RBP eCLIP14.11□□□□□ -0.153e-14■■■■□ 20.3
ACTB-204ENST00000425660 TIAF1O95411 115 aa14.11□□□□□ -0.15
ACTB-204ENST00000425660 DBIP07108 87 aaKnown RBP14.11□□□□□ -0.15
ACTB-204ENST00000425660 H1F0P07305 194 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms