RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 DHRS7Q9Y394 339 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 SPEF1Q9Y4P9 236 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 YLPM1P49750 1951 aaKnown RBP5.58□□□□□ -1.52
SDCBP-203ENST00000424270 LRRC10BA6NIK2 292 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 GLOD5A6NK44 160 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 J3QL48 77 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 SAP18O00422 153 aaKnown RBP5.57□□□□□ -1.52
SDCBP-203ENST00000424270 RTCAO00442 366 aaKnown RBP5.57□□□□□ -1.52
SDCBP-203ENST00000424270 SCO2O43819 266 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 ZIC3O60481 467 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 UGT2B11O75310 529 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 GCM2O75603 506 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-203ENST00000424270 STAMBPO95630 424 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 IFNB1P01574 187 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 APRTP07741 180 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 MSMBP08118 114 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 F7P08709 466 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-203ENST00000424270 NAGAP17050 411 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 GNAZP19086 355 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 GGT1P19440 569 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 OGNP20774 298 aaKnown RBP5.57□□□□□ -1.52
SDCBP-203ENST00000424270 NT5EP21589 574 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 MDKP21741 143 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-203ENST00000424270 OMGP23515 440 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 GRK2P25098 689 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 GSTM2P28161 218 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 IL12BP29460 328 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 APOBEC3AP31941 199 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-203ENST00000424270 BUD31P41223 144 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-203ENST00000424270 MARCKSL1P49006 195 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 RAP1GDS1P52306 607 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 SRSF4Q08170 494 aaKnown RBP5.57□□□□□ -1.52
SDCBP-203ENST00000424270 BAMBIQ13145 260 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 SLAMF1Q13291 335 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 IQCB1Q15051 598 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 GUSBP1Q15486 140 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 TRIP10Q15642 601 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 SPRED3Q2MJR0 410 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 TCHHL1Q5QJ38 904 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-203ENST00000424270 LEG1Q6P5S2 330 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 SASS6Q6UVJ0 657 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 B3GLCTQ6Y288 498 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 CYHR1Q6ZMK1 362 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 SSX8Q7RTT4 187 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 REC114Q7Z4M0 266 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 GABRG1Q8N1C3 465 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 GBP7Q8N8V2 638 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-203ENST00000424270 ACOT4Q8N9L9 421 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 BBOF1Q8ND07 529 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 SRFBP1Q8NEF9 429 aaKnown RBP5.57□□□□□ -1.52
SDCBP-203ENST00000424270 OR56A3Q8NH54 315 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 NANPQ8TBE9 248 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 KRT35Q92764 455 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 SLC25A28Q96A46 364 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 LINGO1Q96FE5 620 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 COL21A1Q96P44 957 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 NAP1L3Q99457 506 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-203ENST00000424270 C1QTNF6Q9BXI9 259 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 NXF5Q9H1B4 397 aaKnown RBP5.57□□□□□ -1.52
SDCBP-203ENST00000424270 OR10A5Q9H207 317 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 DSN1Q9H410 356 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 GOLPH3Q9H4A6 298 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 WDR41Q9HAD4 459 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 ETNK1Q9HBU6 452 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 FBXO6Q9NRD1 293 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-203ENST00000424270 INTS10Q9NVR2 710 aaKnown RBP5.57□□□□□ -1.52
SDCBP-203ENST00000424270 MS4A12Q9NXJ0 267 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 PAQR5Q9NXK6 330 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-203ENST00000424270 BFARQ9NZS9 450 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 KLHL42Q9P2K6 505 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 PHF11Q9UIL8 331 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 SLC22A14Q9Y267 594 aa5.57□□□□□ -1.52
SDCBP-203ENST00000424270 BIRC6Q9NR09 4857 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 A0A1W2PR80 420 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 CIB4A0PJX0 185 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 OR2M5A3KFT3 312 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 PJA2O43164 708 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 CXCL13O43927 109 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 SHOX2O60902 331 aaPredicted RBP5.56□□□□□ -1.52
SDCBP-203ENST00000424270 LILRA1O75019 489 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 PRKRAO75569 313 aaKnown RBP5.56□□□□□ -1.52
SDCBP-203ENST00000424270 WDR47O94967 919 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 GPR75O95800 540 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 OPN1LWP04000 364 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 TACSTD2P09758 323 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 PABPC4LP0CB38 370 aaKnown RBP5.56□□□□□ -1.52
SDCBP-203ENST00000424270 C1GALT1C1LP0DN25 315 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 ADRA2CP18825 462 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 IL11P20809 199 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 HIST1H1TP22492 207 aaPredicted RBP5.56□□□□□ -1.52
SDCBP-203ENST00000424270 PRTN3P24158 256 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 ATP5A1P25705 553 aaKnown RBP5.56□□□□□ -1.52
SDCBP-203ENST00000424270 CD40P25942 277 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 FDFT1P37268 417 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 PTGDSP41222 190 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 GDF10P55107 478 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 AP1S2P56377 157 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 LOXL3P58215 753 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 B3GALT5-AS1P59052 145 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 SLC18A3Q16572 532 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms