RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 PIGAP37287 484 aa15.66■□□□□ 0.1
COL7A1-202ENST00000422991 CD96P40200 585 aa15.66■□□□□ 0.1
COL7A1-202ENST00000422991 CD97P48960 835 aa15.66■□□□□ 0.1
COL7A1-202ENST00000422991 CYB561P49447 251 aa15.66■□□□□ 0.1
COL7A1-202ENST00000422991 TMED10P49755 219 aaKnown RBP15.66■□□□□ 0.1
COL7A1-202ENST00000422991 ARG2P78540 354 aa15.66■□□□□ 0.1
COL7A1-202ENST00000422991 CBX1P83916 185 aa15.66■□□□□ 0.1
COL7A1-202ENST00000422991 CAPRIN1Q14444 709 aaKnown RBP15.66■□□□□ 0.1
COL7A1-202ENST00000422991 ZNF791Q3KP31 576 aaPredicted RBP15.66■□□□□ 0.1
COL7A1-202ENST00000422991 LACTB2Q53H82 288 aaPredicted RBP15.66■□□□□ 0.1
COL7A1-202ENST00000422991 RUNDC3AQ59EK9 446 aa15.66■□□□□ 0.1
COL7A1-202ENST00000422991 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.66■□□□□ 0.1
COL7A1-202ENST00000422991 ZNF227Q86WZ6 799 aa15.66■□□□□ 0.1
COL7A1-202ENST00000422991 HPS6Q86YV9 775 aa15.66■□□□□ 0.1
COL7A1-202ENST00000422991 DND1Q8IYX4 353 aaKnown RBP15.66■□□□□ 0.1
COL7A1-202ENST00000422991 HORMAD2Q8N7B1 307 aa15.66■□□□□ 0.1
COL7A1-202ENST00000422991 ADAMTS15Q8TE58 950 aa15.66■□□□□ 0.1
COL7A1-202ENST00000422991 HAS2Q92819 552 aa15.66■□□□□ 0.1
COL7A1-202ENST00000422991 TMBIM1Q969X1 311 aa15.66■□□□□ 0.1
COL7A1-202ENST00000422991 ROPN1LQ96C74 230 aa15.66■□□□□ 0.1
COL7A1-202ENST00000422991 OMA1Q96E52 524 aa15.66■□□□□ 0.1
COL7A1-202ENST00000422991 RMND5BQ96G75 393 aaPredicted RBP15.66■□□□□ 0.1
COL7A1-202ENST00000422991 ANKRD27Q96NW4 1050 aa15.66■□□□□ 0.1
COL7A1-202ENST00000422991 SLC39A3Q9BRY0 314 aa15.66■□□□□ 0.1
COL7A1-202ENST00000422991 BTBD2Q9BX70 525 aa15.66■□□□□ 0.1
COL7A1-202ENST00000422991 RAD21L1Q9H4I0 556 aa15.66■□□□□ 0.1
COL7A1-202ENST00000422991 IKZF5Q9H5V7 419 aa15.66■□□□□ 0.1
COL7A1-202ENST00000422991 ANKRD10Q9NXR5 420 aa15.66■□□□□ 0.1
COL7A1-202ENST00000422991 TAGLN3Q9UI15 199 aa15.66■□□□□ 0.1
COL7A1-202ENST00000422991 KCNE3Q9Y6H6 103 aa15.66■□□□□ 0.1
COL7A1-202ENST00000422991 DUXAA6NLW8 204 aa15.65■□□□□ 0.1
COL7A1-202ENST00000422991 A8MVJ9 347 aa15.65■□□□□ 0.1
COL7A1-202ENST00000422991 HMGN4O00479 90 aa15.65■□□□□ 0.1
COL7A1-202ENST00000422991 AIM2O14862 343 aa15.65■□□□□ 0.1
COL7A1-202ENST00000422991 TSPAN2O60636 221 aa15.65■□□□□ 0.1
COL7A1-202ENST00000422991 PPM1BO75688 479 aa15.65■□□□□ 0.1
COL7A1-202ENST00000422991 SOX30O94993 753 aa15.65■□□□□ 0.1
COL7A1-202ENST00000422991 PRB1P04280 392 aa15.65■□□□□ 0.1
COL7A1-202ENST00000422991 NAGAP17050 411 aa15.65■□□□□ 0.1
COL7A1-202ENST00000422991 ANXA11P50995 505 aaKnown RBP15.65■□□□□ 0.1
COL7A1-202ENST00000422991 POU6F2P78424 691 aaPredicted RBP15.65■□□□□ 0.1
COL7A1-202ENST00000422991 MRPS22P82650 360 aaKnown RBP15.65■□□□□ 0.1
COL7A1-202ENST00000422991 OC90Q02509 493 aaPredicted RBP15.65■□□□□ 0.1
COL7A1-202ENST00000422991 C19orf57Q0VDD7 668 aa15.65■□□□□ 0.1
COL7A1-202ENST00000422991 FADDQ13158 208 aa15.65■□□□□ 0.1
COL7A1-202ENST00000422991 NTRK2Q16620 822 aa15.65■□□□□ 0.1
COL7A1-202ENST00000422991 DECR1Q16698 335 aa15.65■□□□□ 0.1
COL7A1-202ENST00000422991 IL20RBQ6UXL0 311 aa15.65■□□□□ 0.1
COL7A1-202ENST00000422991 ASB18Q6ZVZ8 466 aa15.65■□□□□ 0.1
COL7A1-202ENST00000422991 TRPM8Q7Z2W7 1104 aa15.65■□□□□ 0.1
COL7A1-202ENST00000422991 CYP4Z2PQ8N1L4 340 aa15.65■□□□□ 0.1
COL7A1-202ENST00000422991 ZADH2Q8N4Q0 377 aa15.65■□□□□ 0.1
COL7A1-202ENST00000422991 BCORP1Q8N888 145 aa15.65■□□□□ 0.1
COL7A1-202ENST00000422991 LRRC58Q96CX6 371 aa15.65■□□□□ 0.1
COL7A1-202ENST00000422991 SIGLEC12Q96PQ1 595 aa15.65■□□□□ 0.1
COL7A1-202ENST00000422991 EFCAB1Q9HAE3 211 aa15.65■□□□□ 0.1
COL7A1-202ENST00000422991 GID8Q9NWU2 228 aa15.65■□□□□ 0.1
COL7A1-202ENST00000422991 HPF1Q9NWY4 346 aa15.65■□□□□ 0.1
COL7A1-202ENST00000422991 CSAG2Q9Y5P2 127 aa15.65■□□□□ 0.1
COL7A1-202ENST00000422991 CFAP46Q8IYW2 2715 aa15.65■□□□□ 0.1
COL7A1-202ENST00000422991 PRRC2CQ9Y520 2896 aaKnown RBP15.65■□□□□ 0.1
COL7A1-202ENST00000422991 DPM1O60762 260 aa15.64■□□□□ 0.09
COL7A1-202ENST00000422991 C1QL1O75973 258 aa15.64■□□□□ 0.09
COL7A1-202ENST00000422991 NEURL1O76050 574 aa15.64■□□□□ 0.09
COL7A1-202ENST00000422991 KCNK2O95069 426 aa15.64■□□□□ 0.09
COL7A1-202ENST00000422991 IL33O95760 270 aa15.64■□□□□ 0.09
COL7A1-202ENST00000422991 AGR2O95994 175 aa15.64■□□□□ 0.09
COL7A1-202ENST00000422991 IGKV1D-16P01601 117 aa15.64■□□□□ 0.09
COL7A1-202ENST00000422991 OR12D1P0DN82 309 aa15.64■□□□□ 0.09
COL7A1-202ENST00000422991 ETFAP13804 333 aa15.64■□□□□ 0.09
COL7A1-202ENST00000422991 NUDT2P50583 147 aa15.64■□□□□ 0.09
COL7A1-202ENST00000422991 TNFSF10P50591 281 aa15.64■□□□□ 0.09
COL7A1-202ENST00000422991 FBXW4P57775 412 aa15.64■□□□□ 0.09
COL7A1-202ENST00000422991 LY6DQ14210 128 aa15.64■□□□□ 0.09
COL7A1-202ENST00000422991 SELPLGQ14242 412 aa15.64■□□□□ 0.09
COL7A1-202ENST00000422991 RGNQ15493 299 aa15.64■□□□□ 0.09
COL7A1-202ENST00000422991 OR1C1Q15619 314 aa15.64■□□□□ 0.09
COL7A1-202ENST00000422991 HEPHL1Q6MZM0 1159 aa15.64■□□□□ 0.09
COL7A1-202ENST00000422991 HACD2Q6Y1H2 254 aa15.64■□□□□ 0.09
COL7A1-202ENST00000422991 RTL4Q6ZR62 310 aa15.64■□□□□ 0.09
COL7A1-202ENST00000422991 MDS2Q8NDY4 140 aa15.64■□□□□ 0.09
COL7A1-202ENST00000422991 FAM110BQ8TC76 370 aa15.64■□□□□ 0.09
COL7A1-202ENST00000422991 DIO2Q92813 273 aa15.64■□□□□ 0.09
COL7A1-202ENST00000422991 RAB8BQ92930 207 aa15.64■□□□□ 0.09
COL7A1-202ENST00000422991 EFHD2Q96C19 240 aaPredicted RBP15.64■□□□□ 0.09
COL7A1-202ENST00000422991 TRIM8Q9BZR9 551 aa15.64■□□□□ 0.09
COL7A1-202ENST00000422991 ZNF71Q9NQZ8 489 aaPredicted RBP15.64■□□□□ 0.09
COL7A1-202ENST00000422991 LRFN1Q9P244 771 aa15.64■□□□□ 0.09
COL7A1-202ENST00000422991 CORO2BQ9UQ03 480 aa15.64■□□□□ 0.09
COL7A1-202ENST00000422991 PCDHGB3Q9Y5G1 929 aa15.64■□□□□ 0.09
COL7A1-202ENST00000422991 OR6C70A6NIJ9 312 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 EVPLLA8MZ36 301 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 ABCB7O75027 752 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 REM1O75628 298 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 CBX6O95503 412 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 AK1P00568 194 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 SFTPCP11686 197 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 BMP2P12643 396 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 GPX2P18283 190 aa15.63■□□□□ 0.09
COL7A1-202ENST00000422991 IL12BP29460 328 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms