RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 FARSBQ9NSD9 589 aaKnown RBP12.81□□□□□ -0.36
NFE4-201ENST00000420058 PRODH2Q9UF12 536 aa12.81□□□□□ -0.36
NFE4-201ENST00000420058 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.8□□□□□ -0.36
NFE4-201ENST00000420058 CCDC189A1A4V9 331 aa12.8□□□□□ -0.36
NFE4-201ENST00000420058 PPP6CO00743 305 aa12.8□□□□□ -0.36
NFE4-201ENST00000420058 GSTA2P09210 222 aa12.8□□□□□ -0.36
NFE4-201ENST00000420058 PEPDP12955 493 aa12.8□□□□□ -0.36
NFE4-201ENST00000420058 TBXA2RP21731 343 aa12.8□□□□□ -0.36
NFE4-201ENST00000420058 MAPK12P53778 367 aa12.8□□□□□ -0.36
NFE4-201ENST00000420058 DSCR4P56555 118 aaPredicted RBP12.8□□□□□ -0.36
NFE4-201ENST00000420058 CLDN20P56880 219 aa12.8□□□□□ -0.36
NFE4-201ENST00000420058 GUCY2DQ02846 1103 aa12.8□□□□□ -0.36
NFE4-201ENST00000420058 C6orf163Q5TEZ5 329 aa12.8□□□□□ -0.36
NFE4-201ENST00000420058 P4HA3Q7Z4N8 544 aa12.8□□□□□ -0.36
NFE4-201ENST00000420058 UBQLNLQ8IYU4 475 aa12.8□□□□□ -0.36
NFE4-201ENST00000420058 PLD6Q8N2A8 252 aaKnown RBP12.8□□□□□ -0.36
NFE4-201ENST00000420058 MEIOBQ8N635 442 aa12.8□□□□□ -0.36
NFE4-201ENST00000420058 MAPK1IP1LQ8NDC0 245 aa12.8□□□□□ -0.36
NFE4-201ENST00000420058 OR4N2Q8NGD1 307 aa12.8□□□□□ -0.36
NFE4-201ENST00000420058 FNDC9Q8TBE3 224 aa12.8□□□□□ -0.36
NFE4-201ENST00000420058 FBF1Q8TES7 1133 aa12.8□□□□□ -0.36
NFE4-201ENST00000420058 ERP44Q9BS26 406 aa12.8□□□□□ -0.36
NFE4-201ENST00000420058 TMEM204Q9BSN7 226 aa12.8□□□□□ -0.36
NFE4-201ENST00000420058 DSN1Q9H410 356 aa12.8□□□□□ -0.36
NFE4-201ENST00000420058 WHRNQ9P202 907 aa12.8□□□□□ -0.36
NFE4-201ENST00000420058 TNPO3Q9Y5L0 923 aaKnown RBP12.8□□□□□ -0.36
NFE4-201ENST00000420058 GOLGA6L10A6NI86 522 aa12.79□□□□□ -0.36
NFE4-201ENST00000420058 CCDC188H7C350 402 aa12.79□□□□□ -0.36
NFE4-201ENST00000420058 FADS1O60427 444 aa12.79□□□□□ -0.36
NFE4-201ENST00000420058 AQP8O94778 261 aa12.79□□□□□ -0.36
NFE4-201ENST00000420058 KLHL2O95198 593 aa12.79□□□□□ -0.36
NFE4-201ENST00000420058 DEKP35659 375 aaKnown RBP12.79□□□□□ -0.36
NFE4-201ENST00000420058 PNLIPRP2P54317 469 aa12.79□□□□□ -0.36
NFE4-201ENST00000420058 TRADDQ15628 312 aa12.79□□□□□ -0.36
NFE4-201ENST00000420058 FAM83EQ2M2I3 478 aa12.79□□□□□ -0.36
NFE4-201ENST00000420058 MROH9Q5TGP6 573 aa12.79□□□□□ -0.36
NFE4-201ENST00000420058 HEPHL1Q6MZM0 1159 aa12.79□□□□□ -0.36
NFE4-201ENST00000420058 LARP4Q71RC2 724 aaKnown RBP eCLIP12.79□□□□□ -0.36
NFE4-201ENST00000420058 PAGE2Q7Z2X7 111 aa12.79□□□□□ -0.36
NFE4-201ENST00000420058 PHC2Q8IXK0 858 aa12.79□□□□□ -0.36
NFE4-201ENST00000420058 CCDC116Q8IYX3 515 aa12.79□□□□□ -0.36
NFE4-201ENST00000420058 OR2M3Q8NG83 312 aa12.79□□□□□ -0.36
NFE4-201ENST00000420058 OR5M1Q8NGP8 315 aa12.79□□□□□ -0.36
NFE4-201ENST00000420058 ZNF675Q8TD23 568 aa12.79□□□□□ -0.36
NFE4-201ENST00000420058 CAVIN3Q969G5 261 aa12.79□□□□□ -0.36
NFE4-201ENST00000420058 KLHL29Q96CT2 875 aa12.79□□□□□ -0.36
NFE4-201ENST00000420058 PINK1Q9BXM7 581 aa12.79□□□□□ -0.36
NFE4-201ENST00000420058 DPH5Q9H2P9 285 aa12.79□□□□□ -0.36
NFE4-201ENST00000420058 PLSCR4Q9NRQ2 329 aa12.79□□□□□ -0.36
NFE4-201ENST00000420058 AHSPQ9NZD4 102 aa12.79□□□□□ -0.36
NFE4-201ENST00000420058 FLRT3Q9NZU0 649 aa12.79□□□□□ -0.36
NFE4-201ENST00000420058 CPSF2Q9P2I0 782 aaKnown RBP12.79□□□□□ -0.36
NFE4-201ENST00000420058 ZNF225Q9UK10 706 aa12.79□□□□□ -0.36
NFE4-201ENST00000420058 DKKL1Q9UK85 242 aa12.79□□□□□ -0.36
NFE4-201ENST00000420058 PCTPQ9UKL6 214 aa12.79□□□□□ -0.36
NFE4-201ENST00000420058 A0A087X1B8 175 aa12.78□□□□□ -0.36
NFE4-201ENST00000420058 OR2M5A3KFT3 312 aa12.78□□□□□ -0.36
NFE4-201ENST00000420058 OVOL3O00110 214 aa12.78□□□□□ -0.36
NFE4-201ENST00000420058 ALDOAP04075 364 aaKnown RBP12.78□□□□□ -0.36
NFE4-201ENST00000420058 SLC6A8P48029 635 aa12.78□□□□□ -0.36
NFE4-201ENST00000420058 KCNJ5P48544 419 aa12.78□□□□□ -0.36
NFE4-201ENST00000420058 ATP5J2P56134 94 aa12.78□□□□□ -0.36
NFE4-201ENST00000420058 EFR3AQ14156 821 aa12.78□□□□□ -0.36
NFE4-201ENST00000420058 PON3Q15166 354 aa12.78□□□□□ -0.36
NFE4-201ENST00000420058 SGO1Q5FBB7 561 aa12.78□□□□□ -0.36
NFE4-201ENST00000420058 BEX5Q5H9J7 111 aa12.78□□□□□ -0.36
NFE4-201ENST00000420058 TECRLQ5HYJ1 363 aa12.78□□□□□ -0.36
NFE4-201ENST00000420058 STAC2Q6ZMT1 411 aa12.78□□□□□ -0.36
NFE4-201ENST00000420058 ZNF704Q6ZNC4 412 aaPredicted RBP12.78□□□□□ -0.36
NFE4-201ENST00000420058 RPS27LQ71UM5 84 aaKnown RBP12.78□□□□□ -0.36
NFE4-201ENST00000420058 CHMP1BQ7LBR1 199 aa12.78□□□□□ -0.36
NFE4-201ENST00000420058 ZNF611Q8N823 705 aa12.78□□□□□ -0.36
NFE4-201ENST00000420058 PTGR2Q8N8N7 351 aaPredicted RBP12.78□□□□□ -0.36
NFE4-201ENST00000420058 LILRB1Q8NHL6 650 aaPredicted RBP12.78□□□□□ -0.36
NFE4-201ENST00000420058 KAT2AQ92830 837 aa12.78□□□□□ -0.36
NFE4-201ENST00000420058 PHF21BQ96EK2 531 aa12.78□□□□□ -0.36
NFE4-201ENST00000420058 KLHL4Q9C0H6 718 aa12.78□□□□□ -0.36
NFE4-201ENST00000420058 MED11Q9P086 117 aa12.78□□□□□ -0.36
NFE4-201ENST00000420058 ZNF175Q9Y473 711 aa12.78□□□□□ -0.36
NFE4-201ENST00000420058 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.78□□□□□ -0.36
NFE4-201ENST00000420058 A0A096LPK6 155 aa12.77□□□□□ -0.37
NFE4-201ENST00000420058 RNF223E7ERA6 249 aa12.77□□□□□ -0.37
NFE4-201ENST00000420058 TMCC2O75069 709 aa12.77□□□□□ -0.37
NFE4-201ENST00000420058 GUCY1B2O75343 617 aa12.77□□□□□ -0.37
NFE4-201ENST00000420058 PDYNP01213 254 aa12.77□□□□□ -0.37
NFE4-201ENST00000420058 THBS1P07996 1170 aa12.77□□□□□ -0.37
NFE4-201ENST00000420058 HK1P19367 917 aa12.77□□□□□ -0.37
NFE4-201ENST00000420058 MAGEA4P43358 317 aa12.77□□□□□ -0.37
NFE4-201ENST00000420058 CCNG1P51959 295 aa12.77□□□□□ -0.37
NFE4-201ENST00000420058 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.77□□□□□ -0.37
NFE4-201ENST00000420058 PRSS53Q2L4Q9 553 aa12.77□□□□□ -0.37
NFE4-201ENST00000420058 TMEM44Q2T9K0 475 aa12.77□□□□□ -0.37
NFE4-201ENST00000420058 GGTA1PQ4G0N0 100 aa12.77□□□□□ -0.37
NFE4-201ENST00000420058 C10orf62Q5T681 223 aaPredicted RBP12.77□□□□□ -0.37
NFE4-201ENST00000420058 FAM214BQ7L5A3 538 aa12.77□□□□□ -0.37
NFE4-201ENST00000420058 CCDC91Q7Z6B0 441 aa12.77□□□□□ -0.37
NFE4-201ENST00000420058 METTL25Q8N6Q8 603 aa12.77□□□□□ -0.37
NFE4-201ENST00000420058 GBP7Q8N8V2 638 aaPredicted RBP12.77□□□□□ -0.37
NFE4-201ENST00000420058 OR4F6Q8NGB9 312 aa12.77□□□□□ -0.37
NFE4-201ENST00000420058 OR4K17Q8NGC6 315 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms