RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 MLYCDO95822 493 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 CRYABP02511 175 aaKnown RBP6.4□□□□□ -1.38
HMGN1-205ENST00000419378 KRT6AP02538 564 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 KRT6BP04259 564 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 ENO1P06733 434 aaKnown RBP6.4□□□□□ -1.38
HMGN1-205ENST00000419378 KLK1P06870 262 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 SP1P08047 785 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 HSD3B1P14060 373 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 ALOX15P16050 662 aaPredicted RBP6.4□□□□□ -1.38
HMGN1-205ENST00000419378 CFPP27918 469 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 HMOX2P30519 316 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 CCT5P48643 541 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 KRT6CP48668 564 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 HTR6P50406 440 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 HLCSP50747 726 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 MAPK12P53778 367 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 PKNOX1P55347 436 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 SLC18A2Q05940 514 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 GALNT1Q10472 559 aaPredicted RBP6.4□□□□□ -1.38
HMGN1-205ENST00000419378 TBL3Q12788 808 aaKnown RBP6.4□□□□□ -1.38
HMGN1-205ENST00000419378 ERCC6LQ2NKX8 1250 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 CCDC153Q494R4 210 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 GAGE13Q4V321 117 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 CCNYL2Q5T2Q4 361 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 NDUFAF5Q5TEU4 345 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 OR52E8Q6IFG1 317 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 SLC25A25Q6KCM7 469 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 C16orf47Q6ZP98 133 aaPredicted RBP6.4□□□□□ -1.38
HMGN1-205ENST00000419378 DGAT2L6Q6ZPD8 337 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 PAGE2Q7Z2X7 111 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 GALNTL5Q7Z4T8 443 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 ST13P4Q8IZP2 240 aaPredicted RBP6.4□□□□□ -1.38
HMGN1-205ENST00000419378 RIBC1Q8N443 379 aaPredicted RBP6.4□□□□□ -1.38
HMGN1-205ENST00000419378 CCNYL1Q8N7R7 359 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 TMEM178AQ8NBL3 297 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 OR8K3Q8NH51 312 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 RDH11Q8TC12 318 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 METTL6Q8TCB7 284 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 AGAP11Q8TF27 550 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 CFHR4Q92496 578 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 UCN3Q969E3 161 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 PPWD1Q96BP3 646 aaKnown RBP6.4□□□□□ -1.38
HMGN1-205ENST00000419378 FBXL20Q96IG2 436 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 KCNA7Q96RP8 456 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 GPHA2Q96T91 129 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 PELOQ9BRX2 385 aaKnown RBP6.4□□□□□ -1.38
HMGN1-205ENST00000419378 CNPPD1Q9BV87 410 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 C12orf65Q9H3J6 166 aaKnown RBP6.4□□□□□ -1.38
HMGN1-205ENST00000419378 TRIM45Q9H8W5 580 aaPredicted RBP6.4□□□□□ -1.38
HMGN1-205ENST00000419378 WDR41Q9HAD4 459 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 AHSPQ9NZD4 102 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 COPS7AQ9UBW8 275 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.4□□□□□ -1.38
HMGN1-205ENST00000419378 LGALS13Q9UHV8 139 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 GRID1Q9ULK0 1009 aa6.4□□□□□ -1.38
HMGN1-205ENST00000419378 A0A1W2PS29 197 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 ASPDHA6ND91 283 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 H3BML4 177 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 WWP2O00308 870 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 OR10H2O60403 315 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 TRIM13O60858 407 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 OR2J2O76002 312 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 GPR75O95800 540 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 IGKV3-11P04433 115 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 RNF224P0DH78 156 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 CPA3P15088 417 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 GYPEP15421 78 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 CHN1P15882 459 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 MST1P26927 711 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 SSR4P51571 173 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 NAGLUP54802 743 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 FOXA1P55317 472 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 DNAJB13P59910 316 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 NAA20P61599 178 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 HMGCS1Q01581 520 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 IFFO1Q0D2I5 559 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 CSTF3Q12996 717 aaKnown RBP6.39□□□□□ -1.39
HMGN1-205ENST00000419378 BIKQ13323 160 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 GALEQ14376 348 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 PCLAFQ15004 111 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 OVCH2Q7RTZ1 564 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 TRABD2AQ86V40 505 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 ZGRF1Q86YA3 2104 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 C10orf107Q8IVU9 208 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 C9orf40Q8IXQ3 194 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 CYP4Z2PQ8N1L4 340 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 MREGQ8N565 214 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 TMEM156Q8N614 296 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 C1orf52Q8N6N3 182 aaKnown RBP6.39□□□□□ -1.39
HMGN1-205ENST00000419378 GBP7Q8N8V2 638 aaPredicted RBP6.39□□□□□ -1.39
HMGN1-205ENST00000419378 CCDC63Q8NA47 563 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 DOK4Q8TEW6 326 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 ZNF721Q8TF20 911 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 SSC4DQ8WTU2 575 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 RIT1Q92963 219 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 RBM18Q96H35 190 aaKnown RBP6.39□□□□□ -1.39
HMGN1-205ENST00000419378 SENP5Q96HI0 755 aaPredicted RBP6.39□□□□□ -1.39
HMGN1-205ENST00000419378 APOPT1Q96IL0 206 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 CLPTM1LQ96KA5 538 aa6.39□□□□□ -1.39
HMGN1-205ENST00000419378 RASL10BQ96S79 203 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms