RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 TCTN2Q96GX1 697 aa13.6□□□□□ -0.23
HLA-DPA1-242ENST00000419277 TMEM80Q96HE8 168 aa13.6□□□□□ -0.23
HLA-DPA1-242ENST00000419277 PLEKHA8Q96JA3 519 aa13.6□□□□□ -0.23
HLA-DPA1-242ENST00000419277 FCRL4Q96PJ5 515 aa13.6□□□□□ -0.23
HLA-DPA1-242ENST00000419277 RHNO1Q9BSD3 238 aa13.6□□□□□ -0.23
HLA-DPA1-242ENST00000419277 GPR174Q9BXC1 333 aa13.6□□□□□ -0.23
HLA-DPA1-242ENST00000419277 C11orf16Q9NQ32 467 aa13.6□□□□□ -0.23
HLA-DPA1-242ENST00000419277 EPHA6Q9UF33 1036 aa13.6□□□□□ -0.23
HLA-DPA1-242ENST00000419277 TESQ9UGI8 421 aaKnown RBP13.6□□□□□ -0.23
HLA-DPA1-242ENST00000419277 OSGIN1Q9UJX0 560 aa13.6□□□□□ -0.23
HLA-DPA1-242ENST00000419277 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.6□□□□□ -0.23
HLA-DPA1-242ENST00000419277 CFL2Q9Y281 166 aa13.6□□□□□ -0.23
HLA-DPA1-242ENST00000419277 REV3LO60673 3130 aa13.6□□□□□ -0.23
HLA-DPA1-242ENST00000419277 CCRL2O00421 344 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 CSF2P04141 144 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 STSP08842 583 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 ALPPL2P10696 532 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 NID1P14543 1247 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 ENDOUP21128 410 aaKnown RBP13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 CAPZBP47756 277 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 RGS6P49758 472 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 FAM53BQ14153 422 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 ZNF750Q32MQ0 723 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 TYW3Q6IPR3 259 aaKnown RBP13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 ZNF730Q6ZMV8 503 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 PLEKHM3Q6ZWE6 761 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 SLC16A11Q8NCK7 471 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 PROKR2Q8NFJ6 384 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 OR9Q1Q8NGQ5 310 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 KAT2AQ92830 837 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 CTHRC1Q96CG8 243 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 SLC35A4Q96G79 324 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 PELOQ9BRX2 385 aaKnown RBP13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 YIPF4Q9BSR8 244 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 RSPO3Q9BXY4 272 aaPredicted RBP13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 AASSQ9UDR5 926 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 NDRG2Q9UN36 371 aaKnown RBP13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 PRODHO43272 600 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 TP53P04637 393 aaPredicted RBP13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 SCG5P05408 212 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 MAP3K8P41279 467 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 PDX1P52945 283 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 NUDT6P53370 316 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 RAB40BQ12829 278 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 ZNHIT3Q15649 155 aaPredicted RBP13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 LTB4RQ15722 352 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 PRICKLE4Q2TBC4 344 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 ARMCX4Q5H9R4 360 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 DCST2Q5T1A1 773 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 SLC36A4Q6YBV0 504 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 ZNF595Q8IYB9 648 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 CA13Q8N1Q1 262 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 SLC9A6Q92581 669 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 COL26A1Q96A83 441 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 SH3YL1Q96HL8 342 aaPredicted RBP13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 NELL2Q99435 816 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 CD180Q99467 661 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 SDF2Q99470 211 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 LRRC61Q9BV99 259 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 RAB33BQ9H082 229 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 DCSTAMPQ9H295 470 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 AKIP1Q9NQ31 210 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 EVA1BQ9NVM1 165 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 DIMT1Q9UNQ2 313 aaKnown RBP13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 TMEM5Q9Y2B1 443 aa13.59□□□□□ -0.23
HLA-DPA1-242ENST00000419277 A0A087WUU8 490 aa13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 LOC105369274A0A096LPK9 316 aa13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 IGHV1OR15-9A0A0B4J2B8 117 aa13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 LOC102723532A0A0G2JNH3 316 aa13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 FAM170BA6NMN3 283 aa13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 FAM227AF5H4B4 570 aa13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 H3BQ06 376 aaPredicted RBP13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 M0R082 166 aa13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 UBXN7O94888 489 aa13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 NADKO95544 446 aaPredicted RBP13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 DBTP11182 482 aaKnown RBP13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 RNH1P13489 461 aaKnown RBP13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 GALNSP34059 522 aa13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 LIPAP38571 399 aa13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 EPHA4P54764 986 aa13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 RACK1P63244 317 aaKnown RBP13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 SIM1P81133 766 aaPredicted RBP13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 ZNF91Q05481 1191 aa13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 MAP4K2Q12851 820 aa13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 DUSP5Q16690 384 aa13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 LEXMQ3ZCV2 418 aa13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 TCTE1Q5JU00 501 aa13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 MBOAT2Q6ZWT7 520 aa13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 OR4N4Q8N0Y3 316 aa13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 COX18Q8N8Q8 333 aa13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 TMEM163Q8TC26 289 aa13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 CDS1Q92903 461 aa13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 SHDQ96IW2 340 aa13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 MGLLQ99685 303 aa13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 ORAI3Q9BRQ5 295 aa13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 ISYNA1Q9NPH2 558 aa13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 ENAMQ9NRM1 1142 aa13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 IL20Q9NYY1 176 aa13.58□□□□□ -0.24
HLA-DPA1-242ENST00000419277 TRBV23OR9-2A0A075B6M9 112 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms