RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 FRMD1Q8N878 549 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 KLHL6Q8WZ60 621 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 CDS1Q92903 461 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 MED31Q9Y3C7 131 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 HEMK1Q9Y5R4 338 aaPredicted RBP7.84□□□□□ -1.15
USP54-203ENST00000418501 C17orf105B2RV13 164 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 CYR61O00622 381 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 MAN1A2O60476 641 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 CAPZA2P47755 286 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 GANABQ14697 944 aaKnown RBP7.84□□□□□ -1.15
USP54-203ENST00000418501 GPR19Q15760 415 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 ZBED5Q49AG3 693 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 ZNF691Q5VV52 312 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 FAHD1Q6P587 224 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 BORAQ6PGQ7 559 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 MORN4Q8NDC4 146 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 OR5D16Q8NGK9 328 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 C7orf34Q96L11 122 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 MUS81Q96NY9 551 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 FEVQ99581 238 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 BCL7BQ9BQE9 202 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 ZPBPQ9BS86 351 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 LMF2Q9BU23 707 aaKnown RBP7.84□□□□□ -1.15
USP54-203ENST00000418501 DGCR6LQ9BY27 220 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 GABARAPL3Q9BY60 117 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 TWSG1Q9GZX9 223 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 CXorf21Q9HAI6 301 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 NTN4Q9HB63 628 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 FOLH1BQ9HBA9 442 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 WDR70Q9NW82 654 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 MAT2BQ9NZL9 334 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 ATG2AQ2TAZ0 1938 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 CYP7B1O75881 506 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 PEX19P40855 299 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 MVDP53602 400 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 DCDP81605 110 aaKnown RBP7.84□□□□□ -1.15
USP54-203ENST00000418501 ROR2Q01974 943 aaKnown RBP7.84□□□□□ -1.15
USP54-203ENST00000418501 IL11RAQ14626 422 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 RPS26P11Q5JNZ5 115 aaPredicted RBP7.84□□□□□ -1.15
USP54-203ENST00000418501 B3GNT6Q6ZMB0 384 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 EPHX4Q8IUS5 362 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 OR7G2Q8NG99 324 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 ZNF420Q8TAQ5 688 aaPredicted RBP7.84□□□□□ -1.15
USP54-203ENST00000418501 DNAJA4Q8WW22 397 aaPredicted RBP7.84□□□□□ -1.15
USP54-203ENST00000418501 ACOT11Q8WXI4 607 aaPredicted RBP7.84□□□□□ -1.15
USP54-203ENST00000418501 C10orf90Q96M02 699 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 GRIP2Q9C0E4 1043 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 NMNAT1Q9HAN9 279 aaPredicted RBP7.84□□□□□ -1.15
USP54-203ENST00000418501 SLAMF7Q9NQ25 335 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 STARD5Q9NSY2 213 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 RSL24D1Q9UHA3 163 aaKnown RBP7.84□□□□□ -1.15
USP54-203ENST00000418501 CBLCQ9ULV8 474 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 AK5Q9Y6K8 562 aa7.84□□□□□ -1.15
USP54-203ENST00000418501 DPPA5A6NC42 116 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 ZNF701M0R085 212 aaPredicted RBP7.83□□□□□ -1.16
USP54-203ENST00000418501 NKX2-2O95096 273 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 B3GALT4O96024 378 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 GGT2P36268 569 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 ATP6V1E1P36543 226 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 YAP1P46937 504 aaKnown RBP7.83□□□□□ -1.16
USP54-203ENST00000418501 LGALS3BPQ08380 585 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 IQCCQ4KMZ1 466 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 RNF220Q5VTB9 566 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 HEPHL1Q6MZM0 1159 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 MISPQ8IVT2 679 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 ALDH16A1Q8IZ83 802 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 FAM86B1Q8N7N1 296 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 C1orf216Q8TAB5 229 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 HSPBAP1Q96EW2 488 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 CDC6Q99741 560 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 PCDHGB1Q9Y5G3 927 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 TBX6O95947 436 aaPredicted RBP7.83□□□□□ -1.16
USP54-203ENST00000418501 SEMG1P04279 462 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 MYL12AP19105 171 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 ATP12AP54707 1039 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 GFERP55789 205 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 BNIP3Q12983 259 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 NSDHLQ15738 373 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 SLC5A8Q8N695 610 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 AMER3Q8N944 861 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 OR8J1Q8NGP2 316 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 SLC35A4Q96G79 324 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 FBXL20Q96IG2 436 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 PRRX2Q99811 253 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 OR10A5Q9H207 317 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 PRAMEF10O60809 474 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 CPNE3O75131 537 aaKnown RBP7.83□□□□□ -1.16
USP54-203ENST00000418501 DIRAS1O95057 198 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 HIST1H2ABP04908 130 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 PRKACGP22612 351 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 LSSP48449 732 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 NKAIN2Q5VXU1 208 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 ZNF613Q6PF04 617 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 HIST3H2AQ7L7L0 130 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 GALNT15Q8N3T1 639 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 OR10Q1Q8NGQ4 319 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 IFI44Q8TCB0 444 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 HIST1H2ACQ93077 130 aa7.83□□□□□ -1.16
USP54-203ENST00000418501 GTPBP3Q969Y2 492 aaKnown RBP7.83□□□□□ -1.16
USP54-203ENST00000418501 C16orf58Q96GQ5 468 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms