RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 HEBP1Q9NRV9 189 aa10.64□□□□□ -0.71
PTCH1-205ENST00000418258 ZNF623O75123 536 aa10.64□□□□□ -0.71
PTCH1-205ENST00000418258 CRTAPO75718 401 aaPredicted RBP10.64□□□□□ -0.71
PTCH1-205ENST00000418258 CDK2P24941 298 aa10.64□□□□□ -0.71
PTCH1-205ENST00000418258 PTGS2P35354 604 aa10.64□□□□□ -0.71
PTCH1-205ENST00000418258 S100A12P80511 92 aa10.64□□□□□ -0.71
PTCH1-205ENST00000418258 TMEM173Q86WV6 379 aaPredicted RBP10.64□□□□□ -0.71
PTCH1-205ENST00000418258 HCAR1Q9BXC0 346 aa10.64□□□□□ -0.71
PTCH1-205ENST00000418258 NXF5Q9H1B4 397 aaKnown RBP10.64□□□□□ -0.71
PTCH1-205ENST00000418258 RGCCQ9H4X1 137 aa10.64□□□□□ -0.71
PTCH1-205ENST00000418258 GPR160Q9UJ42 338 aa10.64□□□□□ -0.71
PTCH1-205ENST00000418258 RRP8O43159 456 aaKnown RBP10.64□□□□□ -0.71
PTCH1-205ENST00000418258 SLITRK5O94991 958 aa10.64□□□□□ -0.71
PTCH1-205ENST00000418258 CD46P15529 392 aa10.64□□□□□ -0.71
PTCH1-205ENST00000418258 PPA1Q15181 289 aa10.64□□□□□ -0.71
PTCH1-205ENST00000418258 PLBD1Q6P4A8 553 aa10.64□□□□□ -0.71
PTCH1-205ENST00000418258 MS4A4EQ96PG1 132 aa10.64□□□□□ -0.71
PTCH1-205ENST00000418258 LMF1Q96S06 567 aa10.64□□□□□ -0.71
PTCH1-205ENST00000418258 ZNF487B1APH4 448 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 NKX3-2P78367 333 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 CFAP77Q6ZQR2 320 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 LRP10Q7Z4F1 713 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 OR5T1Q8NG75 326 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 NPRL2Q8WTW4 380 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 SYT4Q9H2B2 425 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 OR2S2Q9NQN1 319 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 MRPL15Q9P015 296 aaKnown RBP10.63□□□□□ -0.71
PTCH1-205ENST00000418258 DDX60Q8IY21 1712 aaKnown RBP10.63□□□□□ -0.71
PTCH1-205ENST00000418258 A0A087WUU8 490 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 PPP1R3DO95685 299 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 CLIC3O95833 236 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 ZNF865P0CJ78 1059 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-205ENST00000418258 UBL4AP11441 157 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 EPHA1P21709 976 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 OR4D1Q15615 310 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 RPS26P11Q5JNZ5 115 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-205ENST00000418258 CLLU1OSQ5K130 101 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 ENPP6Q6UWR7 440 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 OR5L1Q8NGL2 311 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 POTEKPQ9BYX7 375 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 SOX17Q9H6I2 414 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-205ENST00000418258 TAS2R3Q9NYW6 316 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 A0A1B0GV50 99 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 A0A1W2PPW3 197 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 SLC6A8P48029 635 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 CCDC58Q4VC31 144 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 PKDCCQ504Y2 493 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 ZNF765Q7L2R6 523 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 OR9A2Q8NGT5 310 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 OR5AK2Q8NH90 309 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 RSC1A1Q92681 617 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 RANBP3Q9H6Z4 567 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-205ENST00000418258 LDB3O75112 727 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 ETV5P41161 510 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 HSD17B7P56937 341 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 ZNF773Q6PK81 442 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 FGF13Q92913 245 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 BOCQ9BWV1 1114 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 PLEKHJ1Q9NW61 149 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 PCDHGA8Q9Y5G5 932 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 IFNA1P01562 189 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 ITGB7P26010 798 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 PRPS1P60891 318 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 GALNT1Q10472 559 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-205ENST00000418258 RAB31Q13636 194 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 Q8N402 240 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 LILRB2Q8N423 598 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 MUCL1Q96DR8 90 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 NGBQ9NPG2 151 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 MARCH4Q9P2E8 410 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-205ENST00000418258 TP53TG5Q9Y2B4 290 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 AP1M2Q9Y6Q5 423 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 ARGFXA6NJG6 315 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 FAM171A2A8MVW0 826 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 UCHL1P09936 223 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 HOXD13P35453 343 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 GABRA2P47869 451 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 PITX1P78337 314 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-205ENST00000418258 COMMD6Q7Z4G1 85 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 FAM71F1Q96KD3 344 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-205ENST00000418258 SIGLEC10Q96LC7 697 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 XYLT2Q9H1B5 865 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 LRIT1Q9P2V4 623 aa10.63□□□□□ -0.71
PTCH1-205ENST00000418258 OR52A4PA6NMU1 304 aa10.62□□□□□ -0.71
PTCH1-205ENST00000418258 CYB5BO43169 146 aa10.62□□□□□ -0.71
PTCH1-205ENST00000418258 SNAPC5O75971 98 aa10.62□□□□□ -0.71
PTCH1-205ENST00000418258 OXSR1O95747 527 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-205ENST00000418258 UGT2A3Q6UWM9 527 aa10.62□□□□□ -0.71
PTCH1-205ENST00000418258 OR52B6Q8NGF0 335 aa10.62□□□□□ -0.71
PTCH1-205ENST00000418258 TXNDC15Q96J42 360 aa10.62□□□□□ -0.71
PTCH1-205ENST00000418258 EMC3Q9P0I2 261 aa10.62□□□□□ -0.71
PTCH1-205ENST00000418258 GPR52Q9Y2T5 361 aa10.62□□□□□ -0.71
PTCH1-205ENST00000418258 EEDO75530 441 aaKnown RBP10.62□□□□□ -0.71
PTCH1-205ENST00000418258 MC3RP41968 323 aa10.62□□□□□ -0.71
PTCH1-205ENST00000418258 TDGQ13569 410 aa10.62□□□□□ -0.71
PTCH1-205ENST00000418258 EIF2B1Q14232 305 aaKnown RBP10.62□□□□□ -0.71
PTCH1-205ENST00000418258 PXKQ7Z7A4 578 aa10.62□□□□□ -0.71
PTCH1-205ENST00000418258 ACBD7Q8N6N7 88 aa10.62□□□□□ -0.71
PTCH1-205ENST00000418258 PPP1R35Q8TAP8 253 aa10.62□□□□□ -0.71
PTCH1-205ENST00000418258 SCRN2Q96FV2 425 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms