RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 BROXQ5VW32 411 aa15.64■□□□□ 0.09
SSBP3-205ENST00000417664 OLIG3Q7RTU3 272 aa15.64■□□□□ 0.09
SSBP3-205ENST00000417664 WDR53Q7Z5U6 358 aaPredicted RBP15.64■□□□□ 0.09
SSBP3-205ENST00000417664 COMTD1Q86VU5 262 aa15.64■□□□□ 0.09
SSBP3-205ENST00000417664 DEPDC4Q8N2C3 294 aa15.64■□□□□ 0.09
SSBP3-205ENST00000417664 AQP11Q8NBQ7 271 aa15.64■□□□□ 0.09
SSBP3-205ENST00000417664 SIMC1Q8NDZ2 872 aa15.64■□□□□ 0.09
SSBP3-205ENST00000417664 TOR1AIP2Q8NFQ8 470 aa15.64■□□□□ 0.09
SSBP3-205ENST00000417664 OR9Q2Q8NGE9 314 aa15.64■□□□□ 0.09
SSBP3-205ENST00000417664 GPR151Q8TDV0 419 aa15.64■□□□□ 0.09
SSBP3-205ENST00000417664 NIPSNAP1Q9BPW8 284 aa15.64■□□□□ 0.09
SSBP3-205ENST00000417664 DGCR6LQ9BY27 220 aa15.64■□□□□ 0.09
SSBP3-205ENST00000417664 POLR2J2Q9GZM3 115 aaKnown RBP15.64■□□□□ 0.09
SSBP3-205ENST00000417664 POLR2J3Q9H1A7 115 aaKnown RBP15.64■□□□□ 0.09
SSBP3-205ENST00000417664 CXorf56Q9H5V9 222 aa15.64■□□□□ 0.09
SSBP3-205ENST00000417664 RLIMQ9NVW2 624 aa15.64■□□□□ 0.09
SSBP3-205ENST00000417664 RHCGQ9UBD6 479 aa15.64■□□□□ 0.09
SSBP3-205ENST00000417664 MKLN1Q9UL63 735 aa15.64■□□□□ 0.09
SSBP3-205ENST00000417664 ZNF443Q9Y2A4 671 aaPredicted RBP15.64■□□□□ 0.09
SSBP3-205ENST00000417664 CLDN16Q9Y5I7 305 aa15.64■□□□□ 0.09
SSBP3-205ENST00000417664 SDK1Q7Z5N4 2213 aa15.64■□□□□ 0.09
SSBP3-205ENST00000417664 SH3PXD2BA1X283 911 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 EME2A4GXA9 379 aaPredicted RBP15.63■□□□□ 0.09
SSBP3-205ENST00000417664 KIAA0513O60268 411 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 PRAMEF2O60811 474 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 ANGPTL1O95841 491 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 IL7RP16871 459 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 EEF1B2P24534 225 aaKnown RBP15.63■□□□□ 0.09
SSBP3-205ENST00000417664 GGT2P36268 569 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 COX10Q12887 443 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 ZNF155Q12901 538 aaPredicted RBP15.63■□□□□ 0.09
SSBP3-205ENST00000417664 PIN1Q13526 163 aaPredicted RBP15.63■□□□□ 0.09
SSBP3-205ENST00000417664 DSG2Q14126 1118 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 EXOSC7Q15024 291 aaKnown RBP15.63■□□□□ 0.09
SSBP3-205ENST00000417664 TTLL10Q6ZVT0 673 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 VRK2Q86Y07 508 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 GATAD2AQ86YP4 633 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 SHISA5Q8N114 240 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 OR1L3Q8NH93 324 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 SLC7A13Q8TCU3 470 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 ZG16BQ96DA0 208 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 RBCK1Q9BYM8 510 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 QRSL1Q9H0R6 528 aaKnown RBP15.63■□□□□ 0.09
SSBP3-205ENST00000417664 TMEM9Q9P0T7 183 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 PCDHGA6Q9Y5G7 932 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 HEMK1Q9Y5R4 338 aaPredicted RBP15.63■□□□□ 0.09
SSBP3-205ENST00000417664 SCN2AQ99250 2005 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 TGFBR3LH3BV60 316 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 SLC1A7O00341 560 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 AP3D1O14617 1153 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 DSCR3O14972 297 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 BRINP1O60477 761 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 MRPS14O60783 128 aaKnown RBP15.63■□□□□ 0.09
SSBP3-205ENST00000417664 ABCB7O75027 752 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 CER1O95813 267 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 GASTP01350 101 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 FOLR1P15328 257 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 GABRA3P34903 492 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 FUT7Q11130 342 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 ST3GAL3Q11203 375 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 MAD2L1BPQ15013 274 aaPredicted RBP15.63■□□□□ 0.09
SSBP3-205ENST00000417664 CLPPQ16740 277 aaPredicted RBP15.63■□□□□ 0.09
SSBP3-205ENST00000417664 SYT16Q17RD7 645 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 SNAP47Q5SQN1 464 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 CD300LDQ6UXZ3 194 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 TUBA1CQ9BQE3 449 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 WFDC6Q9BQY6 131 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 GAREM1Q9H706 876 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 FOLH1BQ9HBA9 442 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 CAPN10Q9HC96 672 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 SCN3BQ9NY72 215 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 SRPK3Q9UPE1 567 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 TPRKBQ9Y3C4 175 aa15.63■□□□□ 0.09
SSBP3-205ENST00000417664 TMEM184BQ9Y519 407 aaPredicted RBP15.63■□□□□ 0.09
SSBP3-205ENST00000417664 SIGLEC6O43699 453 aa15.62■□□□□ 0.09
SSBP3-205ENST00000417664 OR10H3O60404 316 aa15.62■□□□□ 0.09
SSBP3-205ENST00000417664 NME6O75414 186 aaPredicted RBP15.62■□□□□ 0.09
SSBP3-205ENST00000417664 CPNE6O95741 557 aa15.62■□□□□ 0.09
SSBP3-205ENST00000417664 CFIP05156 583 aa15.62■□□□□ 0.09
SSBP3-205ENST00000417664 CCNYL3P0C7X3 344 aa15.62■□□□□ 0.09
SSBP3-205ENST00000417664 SPTBP11277 2137 aa15.62■□□□□ 0.09
SSBP3-205ENST00000417664 NID1P14543 1247 aa15.62■□□□□ 0.09
SSBP3-205ENST00000417664 EPHA2P29317 976 aa15.62■□□□□ 0.09
SSBP3-205ENST00000417664 IFNGR2P38484 337 aa15.62■□□□□ 0.09
SSBP3-205ENST00000417664 EMDP50402 254 aa15.62■□□□□ 0.09
SSBP3-205ENST00000417664 UGT2B15P54855 530 aa15.62■□□□□ 0.09
SSBP3-205ENST00000417664 RGS8P57771 180 aaPredicted RBP15.62■□□□□ 0.09
SSBP3-205ENST00000417664 BTG2P78543 158 aa15.62■□□□□ 0.09
SSBP3-205ENST00000417664 ACY1Q03154 408 aa15.62■□□□□ 0.09
SSBP3-205ENST00000417664 NPTX1Q15818 432 aa15.62■□□□□ 0.09
SSBP3-205ENST00000417664 ZSWIM7Q19AV6 140 aa15.62■□□□□ 0.09
SSBP3-205ENST00000417664 LAIR2Q6ISS4 152 aa15.62■□□□□ 0.09
SSBP3-205ENST00000417664 DGAT2L6Q6ZPD8 337 aa15.62■□□□□ 0.09
SSBP3-205ENST00000417664 QSOX2Q6ZRP7 698 aa15.62■□□□□ 0.09
SSBP3-205ENST00000417664 DTWD2Q8NBA8 298 aa15.62■□□□□ 0.09
SSBP3-205ENST00000417664 OR7G1Q8NGA0 311 aa15.62■□□□□ 0.09
SSBP3-205ENST00000417664 OR4D9Q8NGE8 314 aa15.62■□□□□ 0.09
SSBP3-205ENST00000417664 SLC38A4Q969I6 547 aa15.62■□□□□ 0.09
SSBP3-205ENST00000417664 ZNF501Q96CX3 271 aaPredicted RBP15.62■□□□□ 0.09
SSBP3-205ENST00000417664 VSTM2LQ96N03 204 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms