RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 RPS24P62847 133 aaKnown RBP5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 GCNT1Q02742 428 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 TFF3Q07654 80 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 CDH17Q12864 832 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 CALCOCO2Q13137 446 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 ITGADQ13349 1161 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 PMS2P3Q13401 168 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 TNK1Q13470 666 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 PNOCQ13519 176 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 SLC12A1Q13621 1099 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 RAB32Q13637 225 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 IRF4Q15306 451 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 TRIP13Q15645 432 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 DCAF17Q5H9S7 520 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 ATXN7L2Q5T6C5 722 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 KRT80Q6KB66 452 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 HEPHL1Q6MZM0 1159 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 TMEM65Q6PI78 240 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 BRAT1Q6PJG6 821 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 TRIM72Q6ZMU5 477 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 SLC16A12Q6ZSM3 486 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 PRSS48Q7RTY5 328 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 RAB43Q86YS6 212 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 KLHL7Q8IXQ5 586 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 TCTE3Q8IZS6 198 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 PYROXD2Q8N2H3 581 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 SLC43A2Q8N370 569 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 CLIP4Q8N3C7 705 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 GALNT4Q8N4A0 578 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 C11orf65Q8NCR3 313 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 KIAA0895Q8NCT3 520 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 IPMKQ8NFU5 416 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 CCL4L1Q8NHW4 92 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 HEXDCQ8WVB3 486 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 ELMO1Q92556 727 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 FIG4Q92562 907 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 SH3YL1Q96HL8 342 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 VPS39Q96JC1 886 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 RNF170Q96K19 258 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 ZNF597Q96LX8 424 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 PPP3R2Q96LZ3 170 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 FER1L6-AS2Q96M78 137 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 QRFPRQ96P65 431 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 FCRL4Q96PJ5 515 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 LMF1Q96S06 567 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 CHP1Q99653 195 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 VKORC1Q9BQB6 163 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 FAM213AQ9BRX8 229 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 TINAGL1Q9GZM7 467 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 SLC22A4Q9H015 551 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 RACGAP1Q9H0H5 632 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 ALX4Q9H161 411 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 MEGF9Q9H1U4 602 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 ABCG8Q9H221 673 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 CHST8Q9H2A9 424 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 OR51V1Q9H2C8 321 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 OR51M1Q9H341 326 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 LRRC40Q9H9A6 602 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 MSL2Q9HCI7 577 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 SERHLQ9NQF3 203 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 MBNL1Q9NR56 388 aaKnown RBP5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 OLA1Q9NTK5 396 aaKnown RBP5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 PAK1IP1Q9NWT1 392 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 PTTG3PQ9NZH4 202 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 IL36AQ9UHA7 158 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 MID2Q9UJV3 735 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 COPS3Q9UNS2 423 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 MRPS7Q9Y2R9 242 aaKnown RBP5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 STYXL1Q9Y6J8 313 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 A0A0G2JMP0 313 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 NKX2-6A6NCS4 301 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 MBD3L4A6NDZ8 208 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 MBD3L3A6NE82 208 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 AP3D1O14617 1153 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 THAP12O43422 761 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 ZNF780AO75290 641 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 PMPCBO75439 489 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 PDE9AO76083 593 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 TSPAN12O95859 305 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 FTCDO95954 541 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 IGHEP01854 428 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 TPOP07202 933 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 GRPP07492 148 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 FBP1P09467 338 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 FAM157CP0CG43 387 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 ANXA8P13928 327 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 SLC2A4P14672 509 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 FDXRP22570 491 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 NR4A1P22736 598 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 KELP23276 732 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 IL1R2P27930 398 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 NR4A2P43354 598 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 SLC15A1P46059 708 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 SLC7A2P52569 658 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 RIDAP52758 137 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 ARFIP1P53367 373 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 ZNF91Q05481 1191 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 KRTAP1-1Q07627 177 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 ABRQ12979 859 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms