RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 F5H0A9 414 aaPredicted RBP13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 SMAD9O15198 467 aaKnown RBP13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 SNAI1O95863 264 aaPredicted RBP13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 C1GALT1C1LP0DN25 315 aa13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 AHCYP23526 432 aa13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 GPR4P46093 362 aa13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 BAMBIQ13145 260 aa13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 KIAA0040Q15053 153 aa13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 PRAMEF14Q5SWL7 426 aa13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 DCAF4L2Q8NA75 395 aa13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 MCHR1Q99705 422 aa13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 P2RY12Q9H244 342 aa13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 IFT22Q9H7X7 185 aa13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 DDX31Q9H8H2 851 aaKnown RBP13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 IL20RAQ9UHF4 553 aa13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 RCE1Q9Y256 329 aa13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 CSNK1G3Q9Y6M4 447 aa13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 STRCQ7RTU9 1775 aa13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 A0A0U1RQF3 1178 aa13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 PLA2G10O15496 165 aa13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 CHP2O43745 196 aa13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 IGFBP1P08833 259 aaPredicted RBP13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 HOXD9P28356 352 aaPredicted RBP13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 FABP5Q01469 135 aa13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 SERPINA13PQ6UXR4 307 aa13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 SCARB1Q8WTV0 552 aa13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 NOX3Q9HBY0 568 aa13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 C14orf105Q9NVL8 296 aa13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 BABAM2Q9NXR7 383 aa13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 NOP16Q9Y3C1 178 aaKnown RBP13.14□□□□□ -0.31
CLTCL1-201ENST00000412649 PRSS44E7EML9 344 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 HOXA2O43364 376 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 SGCEO43556 437 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 SCN2BO60939 215 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 PSMB1P20618 241 aaKnown RBP13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 HTR4Q13639 388 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 ZNF169Q14929 603 aaPredicted RBP13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 LRRC37A5PQ49AS3 106 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 TPRA1Q86W33 373 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 TRAF4Q9BUZ4 470 aaPredicted RBP13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 XKR8Q9H6D3 395 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 TMEM38AQ9H6F2 299 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 ZSCAN32Q9NX65 697 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 GNG8Q9UK08 70 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 GOSR2O14653 212 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 UBL3O95164 117 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 S100A11P31949 105 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 CCR7P32248 378 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 ERVK-21P61565 698 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 RNF44Q7L0R7 432 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 IFNL1Q8IU54 200 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 FAM26EQ8N5C1 309 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 TRIM43Q96BQ3 446 aaPredicted RBP13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 TMEM169Q96HH4 297 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 MSLNLQ96KJ4 702 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 WRAP53Q9BUR4 548 aaKnown RBP13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 LGR4Q9BXB1 951 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 SLC22A31A6NKX4 558 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 B3GALNT1O75752 331 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 APOC1P02654 83 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 LRG1P02750 347 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 VIPR1P32241 457 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 ADAM8P78325 824 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 SFXN4Q6P4A7 337 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 BEST3Q8N1M1 668 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 FANK1Q8TC84 345 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 CDCP1Q9H5V8 836 aa13.13□□□□□ -0.31
CLTCL1-201ENST00000412649 CARNS1A5YM72 827 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 TMEM88BA6NKF7 163 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 F8W036 122 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 GTPBP1O00178 669 aaKnown RBP13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 RNF13O43567 381 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 UBXN7O94888 489 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 WISP3O95389 354 aaPredicted RBP13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 BLOC1S1P78537 153 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 MPPE1Q53F39 396 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 XKR4Q5GH76 650 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 KLHDC8BQ8IXV7 354 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 LRRC56Q8IYG6 542 aaPredicted RBP13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 OR6K6Q8NGW6 343 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 SYT17Q9BSW7 474 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 LMAN2LQ9H0V9 348 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 EGLN3Q9H6Z9 239 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 ASB6Q9NWX5 421 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 DDNO94850 711 aaPredicted RBP13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 PEX11BO96011 259 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 MAP2K5Q13163 448 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 TPBGQ13641 420 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 EIPR1Q53HC9 387 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 BTN2A1Q7KYR7 527 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 GPR26Q8NDV2 337 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 SUN3Q8TAQ9 357 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 RGMAQ96B86 450 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 RIOK2Q9BVS4 552 aaKnown RBP13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 TRMT61BQ9BVS5 477 aaKnown RBP13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 ZMAT5Q9UDW3 170 aaKnown RBP13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 KIAA1217Q5T5P2 1943 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 SHC1P29353 583 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 VEGFCP49767 419 aa13.12□□□□□ -0.31
CLTCL1-201ENST00000412649 ACTC1P68032 377 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms