RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 RNF44Q7L0R7 432 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 PIWIL4Q7Z3Z4 852 aaKnown RBP4.96□□□□□ -1.62
LINC00342-201ENST00000412393 PPP1R32Q7Z5V6 425 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 CLVS1Q8IUQ0 354 aaPredicted RBP4.96□□□□□ -1.62
LINC00342-201ENST00000412393 CNTN4Q8IWV2 1026 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 CPNE9Q8IYJ1 553 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 OR4N4Q8N0Y3 316 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 METTL27Q8N6F8 245 aaPredicted RBP4.96□□□□□ -1.62
LINC00342-201ENST00000412393 ZNF781Q8N8C0 355 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 CLEC1AQ8NC01 280 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 OR52E4Q8NGH9 312 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 CD200R1Q8TD46 325 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 ZNF480Q8WV37 535 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.96□□□□□ -1.62
LINC00342-201ENST00000412393 KCNJ9Q92806 393 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 MIB2Q96AX9 1013 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 CCDC124Q96CT7 223 aaKnown RBP4.96□□□□□ -1.62
LINC00342-201ENST00000412393 NRBF2Q96F24 287 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 CERS2Q96G23 380 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 CFAP36Q96G28 342 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 GPR22Q99680 433 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 AARSD1Q9BTE6 412 aaKnown RBP4.96□□□□□ -1.62
LINC00342-201ENST00000412393 NUDT9Q9BW91 350 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 OSBPL10Q9BXB5 764 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 TRIM15Q9C019 465 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 WDR12Q9GZL7 423 aaKnown RBP4.96□□□□□ -1.62
LINC00342-201ENST00000412393 RMND5AQ9H871 391 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 SP140LQ9H930 580 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 WDR54Q9H977 334 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 MEAF6Q9HAF1 191 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 NMRAL1Q9HBL8 299 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 HMG20AQ9NP66 347 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 MRPS30Q9NP92 439 aaKnown RBP4.96□□□□□ -1.62
LINC00342-201ENST00000412393 SPAG4Q9NPE6 437 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 SNX15Q9NRS6 342 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 IARS2Q9NSE4 1012 aaKnown RBP4.96□□□□□ -1.62
LINC00342-201ENST00000412393 P4HTMQ9NXG6 502 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 C5AR2Q9P296 337 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 ANKMY1Q9P2S6 941 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 TAC3Q9UHF0 121 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 TRMT6Q9UJA5 497 aaKnown RBP4.96□□□□□ -1.62
LINC00342-201ENST00000412393 CDC42EP3Q9UKI2 254 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 NXT1Q9UKK6 140 aaKnown RBP4.96□□□□□ -1.62
LINC00342-201ENST00000412393 ERVK-11Q9UQG0 969 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 MED16Q9Y2X0 877 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 COX11Q9Y6N1 276 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 MAU2Q9Y6X3 613 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 CPAMD8Q8IZJ3 1885 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 PRORSD1PA6NEY8 169 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 SAC3D1A6NKF1 404 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 E7ENX8 843 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 H0YGG7 62 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 M0QX08 132 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 UGT2B11O75310 529 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 SNX4O95219 450 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 BCL10O95999 233 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 HPRP00739 348 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 C2P06681 752 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 SBK3P0C264 359 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 IL10P22301 178 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 JAK1P23458 1154 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 MMP11P24347 488 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 FASP25445 335 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 IMPA1P29218 277 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 CD40LGP29965 261 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 CAPGP40121 348 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 GSSP48637 474 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 SOX8P57073 446 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 ARF3P61204 181 aaPredicted RBP4.95□□□□□ -1.62
LINC00342-201ENST00000412393 ABATP80404 500 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 TAP2Q03519 686 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 OCA2Q04671 838 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 EPS8Q12929 822 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 PMS2P3Q13401 168 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 BMPR2Q13873 1038 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 SELPLGQ14242 412 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 SQLEQ14534 574 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 RAB39AQ14964 217 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 RBBP7Q16576 425 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 PRTGQ2VWP7 1150 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 ANKDD1AQ495B1 522 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 CYBRD1Q53TN4 286 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 ARL13AQ5H913 290 aaPredicted RBP4.95□□□□□ -1.62
LINC00342-201ENST00000412393 FGD3Q5JSP0 725 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 C6orf10Q5SRN2 563 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 ZNF362Q5T0B9 420 aaPredicted RBP4.95□□□□□ -1.62
LINC00342-201ENST00000412393 RBM20Q5T481 1227 aaKnown RBP4.95□□□□□ -1.62
LINC00342-201ENST00000412393 VWA5B1Q5TIE3 1220 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 ZNF425Q6IV72 752 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 LRRC8EQ6NSJ5 796 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 SHISA6Q6ZSJ9 500 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 UBE2R2Q712K3 238 aaPredicted RBP4.95□□□□□ -1.62
LINC00342-201ENST00000412393 PRSS48Q7RTY5 328 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 ADCK2Q7Z695 626 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 GALNT7Q86SF2 657 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 PAQR7Q86WK9 346 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 DHFR2Q86XF0 187 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 GALNT16Q8N428 558 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 GALNT4Q8N4A0 578 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 SLC15A4Q8N697 577 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms