RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 WFDC6Q9BQY6 131 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 C9orf16Q9BUW7 83 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 BTBD2Q9BX70 525 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 AMBRA1Q9C0C7 1298 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 C14orf105Q9NVL8 296 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 NDUFAF4Q9P032 175 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 GPN3Q9UHW5 284 aaPredicted RBP11.57□□□□□ -0.56
CHMP3-204ENST00000409727 C3orf18Q9UK00 162 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 PADI2Q9Y2J8 665 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 TESMINQ9Y4I5 508 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 CCDC88CQ9P219 2028 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 SPAARA0A1B0GVQ0 90 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 G3V2T6 193 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 M0R3H8 397 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 EI24O14681 340 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 ACOX3O15254 700 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 CAPNS1P04632 268 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 PABPC4LP0CB38 370 aaKnown RBP11.56□□□□□ -0.56
CHMP3-204ENST00000409727 RRM2P31350 389 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 SLC5A2P31639 672 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 GALNSP34059 522 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 MAP3K8P41279 467 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 KCNJ5P48544 419 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 EMP2P54851 167 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 GANABQ14697 944 aaKnown RBP11.56□□□□□ -0.56
CHMP3-204ENST00000409727 EXOSC6Q5RKV6 272 aaKnown RBP11.56□□□□□ -0.56
CHMP3-204ENST00000409727 CDCP2Q5VXM1 449 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 NPSR1Q6W5P4 371 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 DEF8Q6ZN54 512 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 TSEN54Q7Z6J9 526 aaKnown RBP11.56□□□□□ -0.56
CHMP3-204ENST00000409727 PIP4P1Q86T03 277 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 SLCO6A1Q86UG4 719 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 STK32CQ86UX6 486 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 RBM45Q8IUH3 476 aaKnown RBP11.56□□□□□ -0.56
CHMP3-204ENST00000409727 ZDHHC13Q8IUH4 622 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 OR52J3Q8NH60 311 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 METTL21AQ8WXB1 218 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 FBXL20Q96IG2 436 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 ZNF354BQ96LW1 612 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 GAL3ST4Q96RP7 486 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 LMF2Q9BU23 707 aaKnown RBP11.56□□□□□ -0.56
CHMP3-204ENST00000409727 CRB3Q9BUF7 120 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 SPATA5L1Q9BVQ7 753 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 RHCGQ9UBD6 479 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 OR10H1Q9Y4A9 318 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 LRRC42Q9Y546 428 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 DSPPQ9NZW4 1301 aa11.56□□□□□ -0.56
CHMP3-204ENST00000409727 EP300Q09472 2414 aaPredicted RBP11.56□□□□□ -0.56
CHMP3-204ENST00000409727 CENPVL1A0A0U1RR11 272 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 CLDN24A6NM45 220 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 PEX12O00623 359 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 ALOX12BO75342 701 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 STX11O75558 287 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 KCNK2O95069 426 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 PRSS23O95084 383 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 NKX2-2O95096 273 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 DDAH2O95865 285 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 IFNW1P05000 195 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 HOXB6P17509 224 aaKnown RBP11.55□□□□□ -0.56
CHMP3-204ENST00000409727 PRKACGP22612 351 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 SLC37A1P57057 533 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 SPIBQ01892 262 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 IQCCQ4KMZ1 466 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 C3orf38Q5JPI3 329 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 PRAMEF8Q5VWM4 474 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 PRAMEF7Q5VXH5 474 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 ANKRD34AQ69YU3 496 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 ANKRD37Q7Z713 158 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 ZAR1Q86SH2 424 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 CARM1Q86X55 608 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 LACC1Q8IV20 430 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 CHDHQ8NE62 594 aaPredicted RBP11.55□□□□□ -0.56
CHMP3-204ENST00000409727 PLPP5Q8NEB5 264 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 OR7G1Q8NGA0 311 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 OR4D11Q8NGI4 311 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 OR52P1PQ8NH57 321 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 ZNF721Q8TF20 911 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 RASSF5Q8WWW0 418 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 DAZLQ92904 295 aaKnown RBP11.55□□□□□ -0.56
CHMP3-204ENST00000409727 SDCCAG3Q96C92 435 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 C8orf44Q96CB5 159 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 ZNF300Q96RE9 604 aaPredicted RBP11.55□□□□□ -0.56
CHMP3-204ENST00000409727 SPSB2Q99619 263 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 NUDT9Q9BW91 350 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 REEP1Q9H902 201 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 CACYBPQ9HB71 228 aaKnown RBP11.55□□□□□ -0.56
CHMP3-204ENST00000409727 RLIMQ9NVW2 624 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 PRODH2Q9UF12 536 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 SAMHD1Q9Y3Z3 626 aaKnown RBP11.55□□□□□ -0.56
CHMP3-204ENST00000409727 FAM32AQ9Y421 112 aaKnown RBP11.55□□□□□ -0.56
CHMP3-204ENST00000409727 PCDHGA8Q9Y5G5 932 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 VSTM2BA6NLU5 285 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 FRS3O43559 492 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 STK17BO94768 372 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 RASAL1O95294 804 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 EPPINO95925 133 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 CT45A8P0DMV1 189 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 CT45A9P0DMV2 189 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 IL7RP16871 459 aa11.55□□□□□ -0.56
CHMP3-204ENST00000409727 DCTP40126 519 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms