RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 MASP1P48740 699 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 RGS8P57771 180 aaPredicted RBP19.32■□□□□ 0.68
USP39-203ENST00000409470 MVKQ03426 396 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 MGAT2Q10469 447 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 DCST2Q5T1A1 773 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 NKAIN2Q5VXU1 208 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 GPR151Q8TDV0 419 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 PIK3R3Q92569 461 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 MYDGFQ969H8 173 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 PEX11GQ96HA9 241 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 SLC6A14Q9UN76 642 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 IGHV5-51A0A0C4DH38 117 aa19.31■□□□□ 0.68
USP39-203ENST00000409470 A0A1W2PPW3 197 aa19.31■□□□□ 0.68
USP39-203ENST00000409470 HYKKA2RU49 373 aa19.31■□□□□ 0.68
USP39-203ENST00000409470 AP3D1O14617 1153 aa19.31■□□□□ 0.68
USP39-203ENST00000409470 BCAT2O15382 392 aaPredicted RBP19.31■□□□□ 0.68
USP39-203ENST00000409470 IGFBP1P08833 259 aaPredicted RBP19.31■□□□□ 0.68
USP39-203ENST00000409470 AFF3P51826 1226 aaKnown RBP19.31■□□□□ 0.68
USP39-203ENST00000409470 NIPAL1Q6NVV3 410 aa19.31■□□□□ 0.68
USP39-203ENST00000409470 ZCCHC12Q6PEW1 402 aa19.31■□□□□ 0.68
USP39-203ENST00000409470 SLC38A4Q969I6 547 aa19.31■□□□□ 0.68
USP39-203ENST00000409470 PDE7BQ9NP56 450 aa19.31■□□□□ 0.68
USP39-203ENST00000409470 ACOT13Q9NPJ3 140 aa19.31■□□□□ 0.68
USP39-203ENST00000409470 DUSP22Q9NRW4 184 aa19.31■□□□□ 0.68
USP39-203ENST00000409470 MRPS33Q9Y291 106 aaKnown RBP19.31■□□□□ 0.68
USP39-203ENST00000409470 SIT1Q9Y3P8 196 aa19.31■□□□□ 0.68
USP39-203ENST00000409470 HEMK1Q9Y5R4 338 aaPredicted RBP19.31■□□□□ 0.68
USP39-203ENST00000409470 THADAQ6YHU6 1953 aa19.31■□□□□ 0.68
USP39-203ENST00000409470 CLCA1A8K7I4 914 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 K7ESF4 209 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 FOXS1O43638 330 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 CYP7B1O75881 506 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 ZBTB11O95625 1053 aaPredicted RBP19.3■□□□□ 0.68
USP39-203ENST00000409470 PSMB9P28065 219 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 MAT1AQ00266 395 aaKnown RBP19.3■□□□□ 0.68
USP39-203ENST00000409470 STX4Q12846 297 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 VWA5B2Q8N398 1253 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 MORN4Q8NDC4 146 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 DNASE2BQ8WZ79 361 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 GGHQ92820 318 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 ZDHHC12Q96GR4 267 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 AHCYL2Q96HN2 611 aaKnown RBP19.3■□□□□ 0.68
USP39-203ENST00000409470 STACQ99469 402 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 LRIT1Q9P2V4 623 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 TMX2-CTNND1H3BSU7 103 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 STX11O75558 287 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 CDC123O75794 336 aaPredicted RBP19.3■□□□□ 0.68
USP39-203ENST00000409470 IFI6P09912 130 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 MMP11P24347 488 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 HOXC5Q00444 222 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 ST3GAL3Q11203 375 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 ZNF155Q12901 538 aaPredicted RBP19.3■□□□□ 0.68
USP39-203ENST00000409470 TRAM2Q15035 370 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 WDR45BQ5MNZ6 344 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 ZNF836Q6ZNA1 936 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 PLEKHM3Q6ZWE6 761 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 ZER1Q7Z7L7 766 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 ZNF619Q8N2I2 560 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 CTHRC1Q96CG8 243 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 ZNF350Q9GZX5 532 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 CAPN10Q9HC96 672 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 TIMMDC1Q9NPL8 285 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 CLN6Q9NWW5 311 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 SATB2Q9UPW6 733 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 RNF215Q9Y6U7 377 aa19.3■□□□□ 0.68
USP39-203ENST00000409470 CLDN24A6NM45 220 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 NSA2O95478 260 aaKnown RBP19.29■□□□□ 0.68
USP39-203ENST00000409470 TNNI3P19429 210 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 GABRA3P34903 492 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 DMWDQ09019 674 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 COX10Q12887 443 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 DUSP8Q13202 625 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 SRSF5Q13243 272 aaKnown RBP19.29■□□□□ 0.68
USP39-203ENST00000409470 FAM53BQ14153 422 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 ENTPD8Q5MY95 495 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 EXOSC6Q5RKV6 272 aaKnown RBP19.29■□□□□ 0.68
USP39-203ENST00000409470 DGAT2L6Q6ZPD8 337 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 OR6C4Q8NGE1 309 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 OR52R1Q8NGF1 315 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 MMABQ96EY8 250 aaPredicted RBP19.29■□□□□ 0.68
USP39-203ENST00000409470 GUCD1Q96NT3 240 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 SIGLEC11Q96RL6 698 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 MCHR1Q99705 422 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 SEMA4GQ9NTN9 838 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 GPR83Q9NYM4 423 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 AGAP5A6NIR3 686 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 COQ9O75208 318 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 TRHRP34981 398 aaPredicted RBP19.29■□□□□ 0.68
USP39-203ENST00000409470 GABRA4P48169 554 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 ST13P50502 369 aaKnown RBP19.29■□□□□ 0.68
USP39-203ENST00000409470 EPHA4P54764 986 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 LSM11P83369 360 aaKnown RBP eCLIP19.29■□□□□ 0.68
USP39-203ENST00000409470 SYT16Q17RD7 645 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 EIPR1Q53HC9 387 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 TCTE1Q5JU00 501 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 SYT6Q5T7P8 510 aaPredicted RBP19.29■□□□□ 0.68
USP39-203ENST00000409470 GARNL3Q5VVW2 1013 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 SLX4IPQ5VYV7 408 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 C1orf94Q6P1W5 598 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 FIGNL1Q6PIW4 674 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms