RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 CPMP14384 443 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 CSTF2P33240 577 aaKnown RBP eCLIP12.59□□□□□ -0.39
COL6A2-204ENST00000409416 MNX1P50219 401 aaPredicted RBP12.59□□□□□ -0.39
COL6A2-204ENST00000409416 PPP1CAP62136 330 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 DLX2Q07687 328 aaPredicted RBP12.59□□□□□ -0.39
COL6A2-204ENST00000409416 TGM3Q08188 693 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 EIF4HQ15056 248 aaKnown RBP12.59□□□□□ -0.39
COL6A2-204ENST00000409416 NCF4Q15080 339 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 CLPPQ16740 277 aaPredicted RBP12.59□□□□□ -0.39
COL6A2-204ENST00000409416 GPR155Q7Z3F1 870 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 ACOT4Q8N9L9 421 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 LINC01555Q8NAE3 123 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 FBXO15Q8NCQ5 510 aaPredicted RBP12.59□□□□□ -0.39
COL6A2-204ENST00000409416 UBE2E3Q969T4 207 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 MYNNQ9NPC7 610 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 PPIL1Q9Y3C6 166 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 RPN2P04844 631 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 ELAVL4P26378 380 aaKnown RBP12.59□□□□□ -0.39
COL6A2-204ENST00000409416 CSTF1Q05048 431 aaKnown RBP12.59□□□□□ -0.39
COL6A2-204ENST00000409416 FAM209AQ5JX71 171 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 ZNF57Q68EA5 555 aaPredicted RBP12.59□□□□□ -0.39
COL6A2-204ENST00000409416 TCTN3Q6NUS6 607 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 TMEM64Q6YI46 380 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 ASB18Q6ZVZ8 466 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 GPR32P1Q8NGA4 272 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 OR10H4Q8NGA5 316 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 OR4F15Q8NGB8 312 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 SLC7A13Q8TCU3 470 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 ZNF707Q96C28 371 aaPredicted RBP12.59□□□□□ -0.39
COL6A2-204ENST00000409416 RIPOR3Q96MK2 946 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 FAIM2Q9BWQ8 316 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 HOXD1Q9GZZ0 328 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 THSD1Q9NS62 852 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 COQ3Q9NZJ6 369 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 RPL36Q9Y3U8 105 aaKnown RBP12.59□□□□□ -0.39
COL6A2-204ENST00000409416 SPEF1Q9Y4P9 236 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 A0A1W2PQL4 384 aaPredicted RBP12.59□□□□□ -0.39
COL6A2-204ENST00000409416 CCDC182A6NF36 153 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 PRKYO43930 277 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 MPZL2O60487 215 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 SLC2A10O95528 541 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 GABRB1P18505 474 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 ITGB7P26010 798 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 BCL6P41182 706 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 SRP54P61011 504 aaKnown RBP12.59□□□□□ -0.39
COL6A2-204ENST00000409416 SHC2P98077 582 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 MAT1AQ00266 395 aaKnown RBP12.59□□□□□ -0.39
COL6A2-204ENST00000409416 ATAD3CQ5T2N8 411 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 AGAP6Q5VW22 663 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 ZNF544Q6NX49 715 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 ARMC6Q6NXE6 501 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 PODNL1Q6PEZ8 512 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 IL20RBQ6UXL0 311 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 LINC00299Q6ZSB3 139 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 OR4D11Q8NGI4 311 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 TEX47Q8TBZ9 253 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 ENKURQ8TC29 256 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 TM4SF18Q96CE8 201 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 C11orf24Q96F05 449 aaPredicted RBP12.59□□□□□ -0.39
COL6A2-204ENST00000409416 ASB16Q96NS5 453 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 AGAP4Q96P64 663 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 MYADMQ96S97 322 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 ZNF559Q9BR84 538 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 MND1Q9BWT6 205 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 BARHL1Q9BZE3 327 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 TCEAL2Q9H3H9 227 aaPredicted RBP12.59□□□□□ -0.39
COL6A2-204ENST00000409416 GLIPR2Q9H4G4 154 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 NKIRAS2Q9NYR9 191 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 FTSJ1Q9UET6 329 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 TBC1D29Q9UFV1 150 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 UGT2A1Q9Y4X1 527 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 CXCR2P25025 360 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 SDC2P34741 201 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 SLC30A8Q8IWU4 369 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 SLC16A11Q8NCK7 471 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 FAM174AQ8TBP5 190 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 THAP3Q8WTV1 239 aaPredicted RBP12.58□□□□□ -0.4
COL6A2-204ENST00000409416 TMEM38AQ9H6F2 299 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 NUFIP1Q9UHK0 495 aaKnown RBP12.58□□□□□ -0.4
COL6A2-204ENST00000409416 KLK4Q9Y5K2 254 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 CDC14CA4D256 554 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 KHNYNO15037 678 aaKnown RBP12.58□□□□□ -0.4
COL6A2-204ENST00000409416 KIAA0355O15063 1070 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 CDC20Q12834 499 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 OR4C11Q6IEV9 310 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 LAPTM4BQ86VI4 370 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 NRMQ8IXM6 262 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 NUP43Q8NFH3 380 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 OR2L2Q8NH16 312 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 NELL2Q99435 816 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 GPR174Q9BXC1 333 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 HDHD2Q9H0R4 259 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 PAQR5Q9NXK6 330 aaPredicted RBP12.58□□□□□ -0.4
COL6A2-204ENST00000409416 PTGFRNQ9P2B2 879 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 OR10H1Q9Y4A9 318 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 PIP5K1CO60331 668 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 CHRNB1P11230 501 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 GNSP15586 552 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 AHRP35869 848 aa12.58□□□□□ -0.4
COL6A2-204ENST00000409416 HNRNPFP52597 415 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms