RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 TRIB1Q96RU8 372 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 MECRQ9BV79 373 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 LRTM1Q9HBL6 345 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 C1orf109Q9NX04 203 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 SLC17A7Q9P2U7 560 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 MID2Q9UJV3 735 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 ITGB1BP2Q9UKP3 347 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 C19orf53Q9UNZ5 99 aaPredicted RBP17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 WBP11Q9Y2W2 641 aaKnown RBP17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 L3MBTL1Q9Y468 752 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 SLC28A1O00337 649 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 PLOD2O00469 737 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 COQ9O75208 318 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 ACTL6AO96019 429 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 CHRNGP07510 517 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 NUDT17P0C025 328 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 LINC00032P0C843 101 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 ALDH3A1P30838 453 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 NTSP30990 170 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 PNLIPRP2P54317 469 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 GAS1P54826 345 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 MED12LQ86YW9 2145 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 OR2L13Q8N349 312 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 RNF138Q8WVD3 245 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 ELP4Q96EB1 424 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 FAM111AQ96PZ2 611 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 ZNF559Q9BR84 538 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 OR2B2Q9GZK3 357 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 IQCGQ9H095 443 aaKnown RBP17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 MKS1Q9NXB0 559 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 KCNN3Q9UGI6 736 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 MAP1AP78559 2803 aaPredicted RBP17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 TMEM233B4DJY2 109 aa17.53■□□□□ 0.4
SMARCB1-204ENST00000407422 NPIPB8E9PQR5 432 aa17.53■□□□□ 0.4
SMARCB1-204ENST00000407422 RGS14O43566 566 aa17.53■□□□□ 0.4
SMARCB1-204ENST00000407422 SPAG7O75391 227 aa17.53■□□□□ 0.4
SMARCB1-204ENST00000407422 PSMG1O95456 288 aa17.53■□□□□ 0.4
SMARCB1-204ENST00000407422 CYP4B1P13584 511 aa17.53■□□□□ 0.4
SMARCB1-204ENST00000407422 CAPN3P20807 821 aa17.53■□□□□ 0.4
SMARCB1-204ENST00000407422 ZNF136P52737 540 aa17.53■□□□□ 0.4
SMARCB1-204ENST00000407422 MYBPHQ13203 477 aa17.53■□□□□ 0.4
SMARCB1-204ENST00000407422 KANK2Q63ZY3 851 aa17.53■□□□□ 0.4
SMARCB1-204ENST00000407422 ZNF551Q7Z340 670 aaPredicted RBP17.53■□□□□ 0.4
SMARCB1-204ENST00000407422 TRIM42Q8IWZ5 723 aa17.53■□□□□ 0.4
SMARCB1-204ENST00000407422 CIDECQ96AQ7 238 aaPredicted RBP17.53■□□□□ 0.4
SMARCB1-204ENST00000407422 METTL2AQ96IZ6 378 aaKnown RBP17.53■□□□□ 0.4
SMARCB1-204ENST00000407422 TRMOQ9BU70 441 aa17.53■□□□□ 0.4
SMARCB1-204ENST00000407422 DDX18Q9NVP1 670 aaKnown RBP17.53■□□□□ 0.4
SMARCB1-204ENST00000407422 TAS2R10Q9NYW0 307 aa17.53■□□□□ 0.4
SMARCB1-204ENST00000407422 FLRT3Q9NZU0 649 aa17.53■□□□□ 0.4
SMARCB1-204ENST00000407422 DNAJC15Q9Y5T4 150 aa17.53■□□□□ 0.4
SMARCB1-204ENST00000407422 CD8B2A6NJW9 211 aa17.52■□□□□ 0.4
SMARCB1-204ENST00000407422 SLITRK5O94991 958 aa17.52■□□□□ 0.4
SMARCB1-204ENST00000407422 IL2RAP01589 272 aa17.52■□□□□ 0.4
SMARCB1-204ENST00000407422 TCEA1P23193 301 aaKnown RBP17.52■□□□□ 0.4
SMARCB1-204ENST00000407422 GRK2P25098 689 aa17.52■□□□□ 0.4
SMARCB1-204ENST00000407422 STARP49675 285 aa17.52■□□□□ 0.4
SMARCB1-204ENST00000407422 AGFG1P52594 562 aaKnown RBP17.52■□□□□ 0.4
SMARCB1-204ENST00000407422 GFRA1P56159 465 aa17.52■□□□□ 0.4
SMARCB1-204ENST00000407422 PSPHP78330 225 aa17.52■□□□□ 0.4
SMARCB1-204ENST00000407422 SRYQ05066 204 aa17.52■□□□□ 0.4
SMARCB1-204ENST00000407422 GAB1Q13480 694 aa17.52■□□□□ 0.4
SMARCB1-204ENST00000407422 RFTN2Q52LD8 501 aaPredicted RBP17.52■□□□□ 0.4
SMARCB1-204ENST00000407422 ARSKQ6UWY0 536 aa17.52■□□□□ 0.4
SMARCB1-204ENST00000407422 PLXDC2Q6UX71 529 aa17.52■□□□□ 0.4
SMARCB1-204ENST00000407422 RIBC1Q8N443 379 aaPredicted RBP17.52■□□□□ 0.4
SMARCB1-204ENST00000407422 CLHC1Q8NHS4 586 aa17.52■□□□□ 0.4
SMARCB1-204ENST00000407422 FCRL1Q96LA6 429 aa17.52■□□□□ 0.4
SMARCB1-204ENST00000407422 BAIAP2L1Q9UHR4 511 aa17.52■□□□□ 0.4
SMARCB1-204ENST00000407422 LGALS13Q9UHV8 139 aa17.52■□□□□ 0.4
SMARCB1-204ENST00000407422 SYT5O00445 386 aa17.51■□□□□ 0.39
SMARCB1-204ENST00000407422 DVL2O14641 736 aa17.51■□□□□ 0.39
SMARCB1-204ENST00000407422 AKAP10O43572 662 aa17.51■□□□□ 0.39
SMARCB1-204ENST00000407422 CPN1P15169 458 aa17.51■□□□□ 0.39
SMARCB1-204ENST00000407422 SDC1P18827 310 aa17.51■□□□□ 0.39
SMARCB1-204ENST00000407422 POU3F2P20265 443 aaPredicted RBP17.51■□□□□ 0.39
SMARCB1-204ENST00000407422 SRD5A2P31213 254 aa17.51■□□□□ 0.39
SMARCB1-204ENST00000407422 UQCRC1P31930 480 aa17.51■□□□□ 0.39
SMARCB1-204ENST00000407422 RPL38P63173 70 aaKnown RBP17.51■□□□□ 0.39
SMARCB1-204ENST00000407422 HSPB3Q12988 150 aa17.51■□□□□ 0.39
SMARCB1-204ENST00000407422 SF3B4Q15427 424 aaKnown RBP eCLIP17.51■□□□□ 0.393e-8■■■■□ 24.1
SMARCB1-204ENST00000407422 CYP27C1Q4G0S4 372 aa17.51■□□□□ 0.39
SMARCB1-204ENST00000407422 ZNF385BQ569K4 471 aa17.51■□□□□ 0.39
SMARCB1-204ENST00000407422 ARL13AQ5H913 290 aaPredicted RBP17.51■□□□□ 0.39
SMARCB1-204ENST00000407422 CDH24Q86UP0 819 aa17.51■□□□□ 0.39
SMARCB1-204ENST00000407422 IFNEQ86WN2 208 aa17.51■□□□□ 0.39
SMARCB1-204ENST00000407422 C9orf106Q8NAJ2 232 aa17.51■□□□□ 0.39
SMARCB1-204ENST00000407422 ZPLD1Q8TCW7 415 aa17.51■□□□□ 0.39
SMARCB1-204ENST00000407422 AENQ8WTP8 325 aaKnown RBP17.51■□□□□ 0.39
SMARCB1-204ENST00000407422 PKNOX2Q96KN3 472 aa17.51■□□□□ 0.39
SMARCB1-204ENST00000407422 TSSK3Q96PN8 268 aa17.51■□□□□ 0.39
SMARCB1-204ENST00000407422 SH3GL2Q99962 352 aa17.51■□□□□ 0.39
SMARCB1-204ENST00000407422 TUBA1CQ9BQE3 449 aa17.51■□□□□ 0.39
SMARCB1-204ENST00000407422 RTN4RQ9BZR6 473 aa17.51■□□□□ 0.39
SMARCB1-204ENST00000407422 CALHM2Q9HA72 323 aa17.51■□□□□ 0.39
SMARCB1-204ENST00000407422 ZNF629Q9UEG4 869 aaPredicted RBP17.51■□□□□ 0.39
SMARCB1-204ENST00000407422 CBLCQ9ULV8 474 aa17.51■□□□□ 0.39
SMARCB1-204ENST00000407422 MBD3L4A6NDZ8 208 aaPredicted RBP17.5■□□□□ 0.39
SMARCB1-204ENST00000407422 MBD3L3A6NE82 208 aaPredicted RBP17.5■□□□□ 0.39
SMARCB1-204ENST00000407422 MBD3L5A6NJ08 208 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms