RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 A0A0B4J203 849 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 SIGLEC16A6NMB1 481 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 NPIPA3F8WFD2 350 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 H0YIG0 161 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 M0QYV0 167 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 PGRMC2O15173 223 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 HCRTO43612 131 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 CYTIPO60759 359 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 SAP30O75446 220 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 CCDC130P13994 396 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 ADORA2BP29275 332 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 ATP5DP30049 168 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 TUFMP49411 452 aaKnown RBP4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 KRTAP10-9P60411 292 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 RPL10AP62906 217 aaKnown RBP4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 SGCGQ13326 291 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 DUSP5Q16690 384 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 MRGPRG-AS1Q2M3A8 158 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 GOLGA7BQ2TAP0 167 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 PTPN20Q4JDL3 420 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 C14orf177Q52M58 125 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 PMF1Q6P1K2 205 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 C11orf88Q6PI97 169 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 LINC00696Q6ZRV3 163 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 CLEC20AQ6ZU45 233 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 CATSPERDQ86XM0 798 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 SYCE1Q8N0S2 351 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 PRSS35Q8N3Z0 413 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 ZNF461Q8TAF7 563 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 HCAR2Q8TDS4 363 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 MYLPFQ96A32 169 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 CPXM1Q96SM3 734 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 ASCL2Q99929 193 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 C11orf70Q9BRQ4 267 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 TDRD1Q9BXT4 1180 aaKnown RBP4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 UBQLN3Q9H347 655 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 MMADHCQ9H3L0 296 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 SPHK2Q9NRA0 654 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 MRPL17Q9NRX2 175 aaKnown RBP4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 FAM49BQ9NUQ9 324 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 PARVAQ9NVD7 372 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 IL37Q9NZH6 218 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 VPS18Q9P253 973 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 SLC12A6Q9UHW9 1150 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 NCKAP1Q9Y2A7 1128 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 PCDHGA1Q9Y5H4 931 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 MYO18AQ92614 2054 aaKnown RBP4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 TRANK1O15050 2925 aa4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 SHROOM3Q8TF72 1996 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 CHD7Q9P2D1 2997 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 MYOFQ9NZM1 2061 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 FAM170AA1A519 330 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 ILVBLA1L0T0 632 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 FAM92AA1XBS5 289 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 USP27XA6NNY8 438 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 A8MVM7 634 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 TMCO5BA8MYB1 307 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 CLDN5O00501 218 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 MLNRO43193 412 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 NXPH2O95156 264 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 CXCL14O95715 111 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 SLC16A8O95907 504 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 CALCAP01258 141 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 CA3P07451 260 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 OR1D2P34982 312 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 CTNNB1P35222 781 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 MAP3K7CLP57077 242 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 ST8SIA6P61647 398 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 BTG1P62324 171 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 ABRQ12979 859 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 SRSF9Q13242 221 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 GPM6BQ13491 265 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 KRT81Q14533 505 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 SMC1AQ14683 1233 aaKnown RBP4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 ZNF674Q2M3X9 581 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 HLA-BQ31612 363 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 SLC39A12Q504Y0 691 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 PM20D1Q6GTS8 502 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 COX8CQ7Z4L0 72 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 NUP93Q8N1F7 819 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 MRPL43Q8N983 215 aaKnown RBP4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 SMYD1Q8NB12 490 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 UBA3Q8TBC4 463 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 ZNF564Q8TBZ8 553 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 WBP2Q969T9 261 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 B3GALT6Q96L58 329 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 ALS2CR12Q96Q35 445 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 ZNF559Q9BR84 538 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 MED10Q9BTT4 135 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 TRIM62Q9BVG3 475 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 CACNG6Q9BXT2 260 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 FUT8Q9BYC5 575 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 SLC39A8Q9C0K1 460 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 FBXO44Q9H4M3 255 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 LZTFL1Q9NQ48 299 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 ABCB8Q9NUT2 735 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 DNAJC17Q9NVM6 304 aaKnown RBP4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 CNIH4Q9P003 139 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 CYTH4Q9UIA0 394 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 FBXL4Q9UKA2 621 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms