RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 ITGAMP11215 1152 aa23.83■■□□□ 1.41
CPNE1-205ENST00000401607 BIKQ13323 160 aa23.83■■□□□ 1.41
CPNE1-205ENST00000401607 NPTX1Q15818 432 aa23.83■■□□□ 1.41
CPNE1-205ENST00000401607 CLPPQ16740 277 aaPredicted RBP23.83■■□□□ 1.41
CPNE1-205ENST00000401607 VWA2Q5GFL6 755 aa23.83■■□□□ 1.41
CPNE1-205ENST00000401607 COLEC12Q5KU26 742 aa23.83■■□□□ 1.41
CPNE1-205ENST00000401607 SLC5A8Q8N695 610 aa23.83■■□□□ 1.41
CPNE1-205ENST00000401607 ZNF555Q8NEP9 628 aa23.83■■□□□ 1.41
CPNE1-205ENST00000401607 TSLPQ969D9 159 aa23.83■■□□□ 1.41
CPNE1-205ENST00000401607 VSTM2LQ96N03 204 aa23.83■■□□□ 1.41
CPNE1-205ENST00000401607 ZNF578Q96N58 590 aaPredicted RBP23.83■■□□□ 1.41
CPNE1-205ENST00000401607 GFM1Q96RP9 751 aaKnown RBP23.83■■□□□ 1.41
CPNE1-205ENST00000401607 FEVQ99581 238 aa23.83■■□□□ 1.41
CPNE1-205ENST00000401607 NMNAT1Q9HAN9 279 aaPredicted RBP23.83■■□□□ 1.41
CPNE1-205ENST00000401607 KRT84Q9NSB2 600 aa23.83■■□□□ 1.41
CPNE1-205ENST00000401607 RLIMQ9NVW2 624 aa23.83■■□□□ 1.41
CPNE1-205ENST00000401607 GPR55Q9Y2T6 319 aaPredicted RBP23.83■■□□□ 1.41
CPNE1-205ENST00000401607 CENPVL1A0A0U1RR11 272 aa23.83■■□□□ 1.4
CPNE1-205ENST00000401607 NTN3O00634 580 aaPredicted RBP23.83■■□□□ 1.4
CPNE1-205ENST00000401607 SLC16A6O15403 523 aa23.83■■□□□ 1.4
CPNE1-205ENST00000401607 STX11O75558 287 aa23.83■■□□□ 1.4
CPNE1-205ENST00000401607 AK1P00568 194 aa23.83■■□□□ 1.4
CPNE1-205ENST00000401607 CLPSP04118 112 aa23.83■■□□□ 1.4
CPNE1-205ENST00000401607 ZNF883P0CG24 379 aa23.83■■□□□ 1.4
CPNE1-205ENST00000401607 PGDP52209 483 aa23.83■■□□□ 1.4
CPNE1-205ENST00000401607 GTF2A1P52655 376 aaPredicted RBP23.83■■□□□ 1.4
CPNE1-205ENST00000401607 POU6F2P78424 691 aaPredicted RBP23.83■■□□□ 1.4
CPNE1-205ENST00000401607 IL1RL1Q01638 556 aa23.83■■□□□ 1.4
CPNE1-205ENST00000401607 RHAGQ02094 409 aa23.83■■□□□ 1.4
CPNE1-205ENST00000401607 MINDY4Q4G0A6 757 aa23.83■■□□□ 1.4
CPNE1-205ENST00000401607 TSPYL5Q86VY4 417 aaPredicted RBP23.83■■□□□ 1.4
CPNE1-205ENST00000401607 ZNF619Q8N2I2 560 aa23.83■■□□□ 1.4
CPNE1-205ENST00000401607 PHF10Q8WUB8 498 aaKnown RBP23.83■■□□□ 1.4
CPNE1-205ENST00000401607 PSD2Q9BQI7 771 aa23.83■■□□□ 1.4
CPNE1-205ENST00000401607 ZNF443Q9Y2A4 671 aaPredicted RBP23.83■■□□□ 1.4
CPNE1-205ENST00000401607 R4GN57 208 aa23.83■■□□□ 1.4
CPNE1-205ENST00000401607 FER1L5A0AVI2 2057 aa23.83■■□□□ 1.4
CPNE1-205ENST00000401607 LOC100130705A0A1B0GUX0 176 aa23.82■■□□□ 1.4
CPNE1-205ENST00000401607 D6RAR5 112 aa23.82■■□□□ 1.4
CPNE1-205ENST00000401607 H3BNH8 94 aa23.82■■□□□ 1.4
CPNE1-205ENST00000401607 PRAMEF2O60811 474 aa23.82■■□□□ 1.4
CPNE1-205ENST00000401607 SEC24DO94855 1032 aaPredicted RBP23.82■■□□□ 1.4
CPNE1-205ENST00000401607 RPS4Y1P22090 263 aaKnown RBP23.82■■□□□ 1.4
CPNE1-205ENST00000401607 GPR68Q15743 365 aa23.82■■□□□ 1.4
CPNE1-205ENST00000401607 PLA2G2CQ5R387 149 aa23.82■■□□□ 1.4
CPNE1-205ENST00000401607 MFSD4BQ5TF39 518 aa23.82■■□□□ 1.4
CPNE1-205ENST00000401607 FIGNL1Q6PIW4 674 aa23.82■■□□□ 1.4
CPNE1-205ENST00000401607 DBX2Q6ZNG2 339 aa23.82■■□□□ 1.4
CPNE1-205ENST00000401607 COX15Q7KZN9 410 aa23.82■■□□□ 1.4
CPNE1-205ENST00000401607 OR9Q2Q8NGE9 314 aa23.82■■□□□ 1.4
CPNE1-205ENST00000401607 ALPK1Q96QP1 1244 aa23.82■■□□□ 1.4
CPNE1-205ENST00000401607 RIBC2Q9H4K1 309 aa23.82■■□□□ 1.4
CPNE1-205ENST00000401607 SLC22A11Q9NSA0 550 aa23.82■■□□□ 1.4
CPNE1-205ENST00000401607 IFT52Q9Y366 437 aa23.82■■□□□ 1.4
CPNE1-205ENST00000401607 TRBV4-1A0A0J9YWV2 114 aa23.81■■□□□ 1.4
CPNE1-205ENST00000401607 A6NHS1 94 aa23.81■■□□□ 1.4
CPNE1-205ENST00000401607 AGAP5A6NIR3 686 aa23.81■■□□□ 1.4
CPNE1-205ENST00000401607 KIAA0513O60268 411 aa23.81■■□□□ 1.4
CPNE1-205ENST00000401607 PEX5LQ8IYB4 626 aa23.81■■□□□ 1.4
CPNE1-205ENST00000401607 CLIP4Q8N3C7 705 aa23.81■■□□□ 1.4
CPNE1-205ENST00000401607 ZNF615Q8N8J6 731 aa23.81■■□□□ 1.4
CPNE1-205ENST00000401607 SLC38A9Q8NBW4 561 aa23.81■■□□□ 1.4
CPNE1-205ENST00000401607 PTPMT1Q8WUK0 201 aaPredicted RBP23.81■■□□□ 1.4
CPNE1-205ENST00000401607 VPS13AQ96RL7 3174 aa23.81■■□□□ 1.4
CPNE1-205ENST00000401607 OR10A5Q9H207 317 aa23.81■■□□□ 1.4
CPNE1-205ENST00000401607 TRIM45Q9H8W5 580 aaPredicted RBP23.81■■□□□ 1.4
CPNE1-205ENST00000401607 RARRES3Q9UL19 164 aa23.81■■□□□ 1.4
CPNE1-205ENST00000401607 MYRFQ9Y2G1 1151 aa23.81■■□□□ 1.4
CPNE1-205ENST00000401607 C17orf105B2RV13 164 aa23.8■■□□□ 1.4
CPNE1-205ENST00000401607 CCNB2O95067 398 aa23.8■■□□□ 1.4
CPNE1-205ENST00000401607 TNNI3P19429 210 aa23.8■■□□□ 1.4
CPNE1-205ENST00000401607 GRK6P43250 576 aa23.8■■□□□ 1.4
CPNE1-205ENST00000401607 PIN1Q13526 163 aaPredicted RBP23.8■■□□□ 1.4
CPNE1-205ENST00000401607 MAPK14Q16539 360 aa23.8■■□□□ 1.4
CPNE1-205ENST00000401607 PHF19Q5T6S3 580 aa23.8■■□□□ 1.4
CPNE1-205ENST00000401607 NPSR1Q6W5P4 371 aa23.8■■□□□ 1.4
CPNE1-205ENST00000401607 ZNF836Q6ZNA1 936 aa23.8■■□□□ 1.4
CPNE1-205ENST00000401607 RMND5BQ96G75 393 aaPredicted RBP23.8■■□□□ 1.4
CPNE1-205ENST00000401607 GRIP2Q9C0E4 1043 aa23.8■■□□□ 1.4
CPNE1-205ENST00000401607 MKKSQ9NPJ1 570 aaPredicted RBP23.8■■□□□ 1.4
CPNE1-205ENST00000401607 KCNE5Q9UJ90 142 aa23.8■■□□□ 1.4
CPNE1-205ENST00000401607 PCDHGB2Q9Y5G2 931 aa23.8■■□□□ 1.4
CPNE1-205ENST00000401607 NINQ8N4C6 2090 aa23.8■■□□□ 1.4
CPNE1-205ENST00000401607 LNP1A1A4G5 178 aa23.8■■□□□ 1.4
CPNE1-205ENST00000401607 DPPA5A6NC42 116 aa23.8■■□□□ 1.4
CPNE1-205ENST00000401607 FRS3O43559 492 aa23.8■■□□□ 1.4
CPNE1-205ENST00000401607 BRINP1O60477 761 aa23.8■■□□□ 1.4
CPNE1-205ENST00000401607 SMNDC1O75940 238 aaKnown RBP eCLIP23.8■■□□□ 1.41e-15■■■■□ 21.1
CPNE1-205ENST00000401607 SOX30O94993 753 aa23.8■■□□□ 1.4
CPNE1-205ENST00000401607 KCNK2O95069 426 aa23.8■■□□□ 1.4
CPNE1-205ENST00000401607 H1F0P07305 194 aaKnown RBP23.8■■□□□ 1.4
CPNE1-205ENST00000401607 ANXA8P13928 327 aa23.8■■□□□ 1.4
CPNE1-205ENST00000401607 ELAVL4P26378 380 aaKnown RBP23.8■■□□□ 1.4
CPNE1-205ENST00000401607 FOXD4Q12950 439 aaPredicted RBP23.8■■□□□ 1.4
CPNE1-205ENST00000401607 ZNHIT3Q15649 155 aaPredicted RBP23.8■■□□□ 1.4
CPNE1-205ENST00000401607 AP1ARQ63HQ0 302 aa23.8■■□□□ 1.4
CPNE1-205ENST00000401607 PWWP2BQ6NUJ5 590 aa23.8■■□□□ 1.4
CPNE1-205ENST00000401607 ZAR1Q86SH2 424 aa23.8■■□□□ 1.4
CPNE1-205ENST00000401607 TAGAPQ8N103 731 aa23.8■■□□□ 1.4
CPNE1-205ENST00000401607 ZNF786Q8N393 782 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms