RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 TSEN15Q8WW01 171 aaKnown RBP17.46■□□□□ 0.38
USP48-204ENST00000400301 SAMD11Q96NU1 681 aa17.46■□□□□ 0.38
USP48-204ENST00000400301 RNF167Q9H6Y7 350 aa17.46■□□□□ 0.38
USP48-204ENST00000400301 SIRT5Q9NXA8 310 aa17.46■□□□□ 0.38
USP48-204ENST00000400301 SCN10AQ9Y5Y9 1956 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 URB1O60287 2271 aaKnown RBP17.45■□□□□ 0.38
USP48-204ENST00000400301 RHPN2P1A8MT19 583 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 LILRB3O75022 631 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 ATP5A1P25705 553 aaKnown RBP17.45■□□□□ 0.38
USP48-204ENST00000400301 METAP1P53582 386 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 TMEM52BQ4KMG9 183 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 OR6T1Q8NGN1 323 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 ACOT11Q8WXI4 607 aaPredicted RBP17.45■□□□□ 0.38
USP48-204ENST00000400301 CDS1Q92903 461 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 TM9SF2Q99805 663 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 ABCG4Q9H172 646 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 TDRD15B5MCY1 1934 aaKnown RBP17.45■□□□□ 0.38
USP48-204ENST00000400301 MICAL3Q7RTP6 2002 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 INMT-MINDY4F8WBC2 141 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 TAS2R43P59537 309 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 RAB40BQ12829 278 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 MLLT11Q13015 90 aaPredicted RBP17.45■□□□□ 0.38
USP48-204ENST00000400301 ZNF750Q32MQ0 723 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 EOGTQ5NDL2 527 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 CCNJQ5T5M9 372 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 C18orf63Q68DL7 685 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 SLC37A3Q8NCC5 494 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 GAL3ST3Q96A11 431 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 IL21RQ9HBE5 538 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 SLC52A3Q9NQ40 469 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.45■□□□□ 0.38
USP48-204ENST00000400301 HOXA9P31269 272 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 UGT2B10P36537 528 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 SLC19A1P41440 591 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 PITPNAQ00169 270 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 ZNF761Q86XN6 746 aaPredicted RBP17.45■□□□□ 0.38
USP48-204ENST00000400301 C10orf111Q8N326 155 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 SLC44A3Q8N4M1 653 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 GRPEL2Q8TAA5 225 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 PHOSPHO1Q8TCT1 267 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 SLC7A13Q8TCU3 470 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 OR6C2Q9NZP2 312 aa17.45■□□□□ 0.38
USP48-204ENST00000400301 NPIPA5A0A0B4J1W7 369 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 SLC22A31A6NKX4 558 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 NPIPA7E9PJI5 369 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 UBXN7O94888 489 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 NPIPA8P0DM63 369 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 SSTR4P31391 388 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 NAA10P41227 235 aaPredicted RBP17.44■□□□□ 0.38
USP48-204ENST00000400301 PRKCDQ05655 676 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 CRYZQ08257 329 aaKnown RBP17.44■□□□□ 0.38
USP48-204ENST00000400301 METRNLQ641Q3 311 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 LILRA6Q6PI73 481 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 FAM83FQ8NEG4 500 aaPredicted RBP17.44■□□□□ 0.38
USP48-204ENST00000400301 DYNC2LI1Q8TCX1 351 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 PRR14Q9BWN1 585 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 CLEC2DQ9UHP7 191 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 A0A1W2PRG6 482 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 FAM172BPA6NC97 362 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 FAM183AA6NL82 134 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 GKN3PP0CG01 181 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 CBLP22681 906 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 RPE65Q16518 533 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 CTF1Q16619 201 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 NINQ8N4C6 2090 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 METTL27Q8N6F8 245 aaPredicted RBP17.44■□□□□ 0.38
USP48-204ENST00000400301 OR2L8Q8NGY9 312 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 ATG4BQ9Y4P1 393 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 A0A1B0GVT2 93 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 KIAA0355O15063 1070 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 IL12BP29460 328 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 MNDAP41218 407 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 GATSQ8NAP1 163 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 CYB561A3Q8NBI2 242 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 C1orf216Q8TAB5 229 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 PIGKQ92643 395 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 ZFYVE21Q9BQ24 234 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 SLC23A2Q9UGH3 650 aa17.44■□□□□ 0.38
USP48-204ENST00000400301 ANXA2P2A6NMY6 339 aa17.43■□□□□ 0.38
USP48-204ENST00000400301 NDUFB5O43674 189 aa17.43■□□□□ 0.38
USP48-204ENST00000400301 TMPRSS11DO60235 418 aa17.43■□□□□ 0.38
USP48-204ENST00000400301 ANXA2P07355 339 aaKnown RBP17.43■□□□□ 0.38
USP48-204ENST00000400301 IGFBP1P08833 259 aaPredicted RBP17.43■□□□□ 0.38
USP48-204ENST00000400301 TFPIP10646 304 aa17.43■□□□□ 0.38
USP48-204ENST00000400301 AHRP35869 848 aa17.43■□□□□ 0.38
USP48-204ENST00000400301 LINC00299Q6ZSB3 139 aa17.43■□□□□ 0.38
USP48-204ENST00000400301 ZNF676Q8N7Q3 588 aa17.43■□□□□ 0.38
USP48-204ENST00000400301 SFXN5Q8TD22 340 aa17.43■□□□□ 0.38
USP48-204ENST00000400301 ERVK-11Q9UQG0 969 aa17.43■□□□□ 0.38
USP48-204ENST00000400301 TMEM215Q68D42 235 aa17.43■□□□□ 0.38
USP48-204ENST00000400301 C12orf40Q86WS4 652 aa17.43■□□□□ 0.38
USP48-204ENST00000400301 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.43■□□□□ 0.38
USP48-204ENST00000400301 TMEM163Q8TC26 289 aa17.43■□□□□ 0.38
USP48-204ENST00000400301 C7orf34Q96L11 122 aa17.43■□□□□ 0.38
USP48-204ENST00000400301 C5orf34Q96MH7 638 aa17.43■□□□□ 0.38
USP48-204ENST00000400301 TTYH2Q9BSA4 534 aa17.43■□□□□ 0.38
USP48-204ENST00000400301 PLCXD1Q9NUJ7 323 aa17.43■□□□□ 0.38
USP48-204ENST00000400301 CSTAP01040 98 aa17.43■□□□□ 0.38
USP48-204ENST00000400301 NR4A2P43354 598 aa17.43■□□□□ 0.38
USP48-204ENST00000400301 AP3S2P59780 193 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms