RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 GPM6BQ13491 265 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 OPCMLQ14982 345 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 USF2Q15853 346 aaPredicted RBP13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 MSANTD1Q6ZTZ1 278 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 ZBTB44Q8NCP5 570 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 ZNF680Q8NEM1 530 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 ST8SIA4Q92187 359 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 RGMAQ96B86 450 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 F2RL3Q96RI0 385 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 C5AR2Q9P296 337 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 ASB1Q9Y576 335 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 PCDHGB7Q9Y5F8 929 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 NDUFS4O43181 175 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 LATS1O95835 1130 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 CFL1P23528 166 aaKnown RBP13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 PCGF2P35227 344 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 XKR7Q5GH72 579 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 FAM76BQ5HYJ3 339 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 SAXO2Q658L1 398 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 ANKK1Q8NFD2 765 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 OR8S1Q8NH09 359 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 STOML3Q8TAV4 291 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 RELTQ969Z4 430 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 OR2M2Q96R28 347 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 COPS3Q9UNS2 423 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 EDDM13A0A1B0GTR0 161 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 LATO43561 262 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 RGS9O75916 674 aaPredicted RBP13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 RBM34P42696 430 aaKnown RBP13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 CTSCP53634 463 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 RPS25P62851 125 aaKnown RBP13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 ZNF831Q5JPB2 1677 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 BCDIN3DQ7Z5W3 292 aaKnown RBP13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 CLDN22Q8N7P3 220 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 LSMEM1Q8N8F7 131 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 HERVK_113Q902F9 699 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 OSTF1Q92882 214 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 FOXJ1Q92949 421 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 ERVMER34-1Q9H9K5 563 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 POT1Q9NUX5 634 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 EVA1BQ9NVM1 165 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 M0R036 132 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 ITGA10O75578 1167 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 MT-ND4P03905 459 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 RLN2P04090 185 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 SLC35G6P0C7Q6 338 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 CBLP22681 906 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 HLA-DMAP28067 261 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 CLCN7P51798 805 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 DHCR24Q15392 516 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 RPS26P11Q5JNZ5 115 aaPredicted RBP13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 SLC30A6Q6NXT4 461 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 BHLHA9Q7RTU4 235 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 GLCCI1Q86VQ1 547 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 ARMC10Q8N2F6 343 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 OR7G3Q8NG95 312 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 TRIB3Q96RU7 358 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 DPEP2Q9H4A9 486 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 IFT46Q9NQC8 304 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 VNN3Q9NY84 501 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 RASD1Q9Y272 281 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 NRXN2Q9P2S2 1712 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 OR7A17O14581 309 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 ARPC1BO15143 372 aaKnown RBP13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 KCNK5O95279 499 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 OR12D1P0DN82 309 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 HTR2AP28223 471 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 RAB5BP61020 215 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 SBSNQ6UWP8 590 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 ENPP7Q6UWV6 458 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 RANBP3LQ86VV4 465 aaPredicted RBP13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 DCUN1D3Q8IWE4 304 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 POGLUT1Q8NBL1 392 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 LINC01599Q8WXQ3 324 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 TMEM19Q96HH6 336 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 PCBD2Q9H0N5 130 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 RSPH9Q9H1X1 276 aaPredicted RBP13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 SRMSQ9H3Y6 488 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 ZSCAN32Q9NX65 697 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 SLC25A37Q9NYZ2 338 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 COLEC10Q9Y6Z7 277 aa13.81□□□□□ -0.2
RPRD1A-202ENST00000399022 KRBOX1C9JBD0 128 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 CACNG3O60359 315 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 RIPPLY1Q0D2K3 151 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 TRAM2Q15035 370 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 HMGB4Q8WW32 186 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 OR2A14Q96R47 310 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 FANCFQ9NPI8 374 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 FBXL12Q9NXK8 326 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 CALML5Q9NZT1 146 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 SCP2D1Q9UJQ7 156 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 PCDHGB1Q9Y5G3 927 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 FEZF1A0PJY2 475 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 ANHXE9PGG2 379 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 FAM227AF5H4B4 570 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 HTR1AP08908 422 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 ZNF14P17017 642 aaPredicted RBP13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 DDX6P26196 483 aaKnown RBP eCLIP13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 ARFIP1P53367 373 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 KIAA1024LP59773 190 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms