RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 KCNS2Q9ULS6 477 aa2.59□□□□□ -1.99
CHD9-202ENST00000398510 RNF6Q9Y252 685 aa2.59□□□□□ -1.99
CHD9-202ENST00000398510 LRRC42Q9Y546 428 aa2.59□□□□□ -1.99
CHD9-202ENST00000398510 PCDHGA6Q9Y5G7 932 aa2.59□□□□□ -1.99
CHD9-202ENST00000398510 ARHGAP21Q5T5U3 1957 aa2.59□□□□□ -1.99
CHD9-202ENST00000398510 GTF3C1Q12789 2109 aa2.59□□□□□ -2
CHD9-202ENST00000398510 COL5A1P20908 1838 aaPredicted RBP2.59□□□□□ -2
CHD9-202ENST00000398510 EME2A4GXA9 379 aaPredicted RBP2.59□□□□□ -2
CHD9-202ENST00000398510 NOTOA8MTQ0 251 aa2.59□□□□□ -2
CHD9-202ENST00000398510 GALR3O60755 368 aaPredicted RBP2.59□□□□□ -2
CHD9-202ENST00000398510 HLA-HP01893 362 aa2.59□□□□□ -2
CHD9-202ENST00000398510 BPGMP07738 259 aa2.59□□□□□ -2
CHD9-202ENST00000398510 PRKAR1BP31321 381 aa2.59□□□□□ -2
CHD9-202ENST00000398510 CSKP41240 450 aa2.59□□□□□ -2
CHD9-202ENST00000398510 DNAJB13P59910 316 aa2.59□□□□□ -2
CHD9-202ENST00000398510 RUNX3Q13761 415 aa2.59□□□□□ -2
CHD9-202ENST00000398510 TATDN3Q17R31 274 aa2.59□□□□□ -2
CHD9-202ENST00000398510 CLEC20AQ6ZU45 233 aa2.59□□□□□ -2
CHD9-202ENST00000398510 HTR3DQ70Z44 454 aa2.59□□□□□ -2
CHD9-202ENST00000398510 OR5T2Q8NGG2 359 aa2.59□□□□□ -2
CHD9-202ENST00000398510 TWNKQ96RR1 684 aa2.59□□□□□ -2
CHD9-202ENST00000398510 ZNF587Q96SQ5 575 aaPredicted RBP2.59□□□□□ -2
CHD9-202ENST00000398510 PCDHB18PQ96TA0 734 aa2.59□□□□□ -2
CHD9-202ENST00000398510 MTERF1Q99551 399 aaKnown RBP2.59□□□□□ -2
CHD9-202ENST00000398510 ATP13A2Q9NQ11 1180 aa2.59□□□□□ -2
CHD9-202ENST00000398510 FKBP11Q9NYL4 201 aa2.59□□□□□ -2
CHD9-202ENST00000398510 KLF13Q9Y2Y9 288 aaPredicted RBP2.59□□□□□ -2
CHD9-202ENST00000398510 ZCWPW2A0A1B0GU75 182 aa2.59□□□□□ -2
CHD9-202ENST00000398510 MDFIC2A0A1B0GVS7 189 aa2.59□□□□□ -2
CHD9-202ENST00000398510 MTMR11A4FU01 709 aa2.59□□□□□ -2
CHD9-202ENST00000398510 YDJCA8MPS7 323 aa2.59□□□□□ -2
CHD9-202ENST00000398510 CSTAP01040 98 aa2.59□□□□□ -2
CHD9-202ENST00000398510 EGFP01133 1207 aa2.59□□□□□ -2
CHD9-202ENST00000398510 CLEC3BP05452 202 aa2.59□□□□□ -2
CHD9-202ENST00000398510 ASGR2P07307 311 aa2.59□□□□□ -2
CHD9-202ENST00000398510 XRCC1P18887 633 aaPredicted RBP2.59□□□□□ -2
CHD9-202ENST00000398510 HTR2AP28223 471 aa2.59□□□□□ -2
CHD9-202ENST00000398510 ARL2P36404 184 aa2.59□□□□□ -2
CHD9-202ENST00000398510 CHRNA4P43681 627 aa2.59□□□□□ -2
CHD9-202ENST00000398510 PITPNBP48739 271 aa2.59□□□□□ -2
CHD9-202ENST00000398510 NFATC2Q13469 925 aa2.59□□□□□ -2
CHD9-202ENST00000398510 EPC2Q52LR7 807 aa2.59□□□□□ -2
CHD9-202ENST00000398510 FAM182BQ5T319 152 aa2.59□□□□□ -2
CHD9-202ENST00000398510 VWA5B1Q5TIE3 1220 aa2.59□□□□□ -2
CHD9-202ENST00000398510 OR2T5Q6IEZ7 315 aa2.59□□□□□ -2
CHD9-202ENST00000398510 CXorf57Q6NSI4 855 aaKnown RBP2.59□□□□□ -2
CHD9-202ENST00000398510 TNFAIP8L2Q6P589 184 aaPredicted RBP2.59□□□□□ -2
CHD9-202ENST00000398510 FAM131AQ6UXB0 335 aa2.59□□□□□ -2
CHD9-202ENST00000398510 LARP4Q71RC2 724 aaKnown RBP eCLIP2.59□□□□□ -2
CHD9-202ENST00000398510 CUZD1Q86UP6 607 aa2.59□□□□□ -2
CHD9-202ENST00000398510 ZNF615Q8N8J6 731 aa2.59□□□□□ -2
CHD9-202ENST00000398510 OR56B1Q8NGI3 324 aa2.59□□□□□ -2
CHD9-202ENST00000398510 OR2T29Q8NH02 315 aa2.59□□□□□ -2
CHD9-202ENST00000398510 LRRN4Q8WUT4 740 aa2.59□□□□□ -2
CHD9-202ENST00000398510 EDAQ92838 391 aa2.59□□□□□ -2
CHD9-202ENST00000398510 INTS12Q96CB8 462 aaKnown RBP2.59□□□□□ -2
CHD9-202ENST00000398510 TM6SF2Q9BZW4 377 aa2.59□□□□□ -2
CHD9-202ENST00000398510 NUDT15Q9NV35 164 aa2.59□□□□□ -2
CHD9-202ENST00000398510 A0A1B0GX78 115 aa2.59□□□□□ -2
CHD9-202ENST00000398510 K7EQS6 105 aa2.59□□□□□ -2
CHD9-202ENST00000398510 M0R036 132 aa2.59□□□□□ -2
CHD9-202ENST00000398510 ENDOD1O94919 500 aa2.59□□□□□ -2
CHD9-202ENST00000398510 CTXN2P0C2S0 81 aa2.59□□□□□ -2
CHD9-202ENST00000398510 ELNP15502 786 aa2.59□□□□□ -2
CHD9-202ENST00000398510 POU3F3P20264 500 aaPredicted RBP2.59□□□□□ -2
CHD9-202ENST00000398510 PRKACBP22694 351 aa2.59□□□□□ -2
CHD9-202ENST00000398510 KIR2DS2P43631 304 aa2.59□□□□□ -2
CHD9-202ENST00000398510 CYB561P49447 251 aa2.59□□□□□ -2
CHD9-202ENST00000398510 ADARP55265 1226 aaKnown RBP2.59□□□□□ -2
CHD9-202ENST00000398510 RPS13P62277 151 aaKnown RBP2.59□□□□□ -2
CHD9-202ENST00000398510 ZNF45Q02386 682 aa2.59□□□□□ -2
CHD9-202ENST00000398510 FOLH1Q04609 750 aa2.59□□□□□ -2
CHD9-202ENST00000398510 GAB1Q13480 694 aa2.59□□□□□ -2
CHD9-202ENST00000398510 PRAMEF17Q5VTA0 474 aa2.59□□□□□ -2
CHD9-202ENST00000398510 DPPA4Q7L190 304 aa2.59□□□□□ -2
CHD9-202ENST00000398510 POGLUT1Q8NBL1 392 aa2.59□□□□□ -2
CHD9-202ENST00000398510 OR4K1Q8NGD4 311 aa2.59□□□□□ -2
CHD9-202ENST00000398510 CPNE4Q96A23 557 aaPredicted RBP2.59□□□□□ -2
CHD9-202ENST00000398510 P2RY11Q96G91 374 aa2.59□□□□□ -2
CHD9-202ENST00000398510 SLC17A9Q9BYT1 436 aa2.59□□□□□ -2
CHD9-202ENST00000398510 MTHFD2LQ9H903 347 aaPredicted RBP2.59□□□□□ -2
CHD9-202ENST00000398510 TESQ9UGI8 421 aaKnown RBP2.59□□□□□ -2
CHD9-202ENST00000398510 ZNF221Q9UK13 617 aa2.59□□□□□ -2
CHD9-202ENST00000398510 TBC1D24Q9ULP9 559 aa2.59□□□□□ -2
CHD9-202ENST00000398510 POMPQ9Y244 141 aa2.59□□□□□ -2
CHD9-202ENST00000398510 RNF215Q9Y6U7 377 aa2.59□□□□□ -2
CHD9-202ENST00000398510 ZNF541Q9H0D2 1346 aa2.59□□□□□ -2
CHD9-202ENST00000398510 A0A0B4J203 849 aa2.58□□□□□ -2
CHD9-202ENST00000398510 A0A1W2PRU2 124 aa2.58□□□□□ -2
CHD9-202ENST00000398510 TMEM72A0PK05 275 aa2.58□□□□□ -2
CHD9-202ENST00000398510 TP73O15350 636 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ECI2O75521 394 aa2.58□□□□□ -2
CHD9-202ENST00000398510 APOA2P02652 100 aa2.58□□□□□ -2
CHD9-202ENST00000398510 IQCF3P0C7M6 154 aa2.58□□□□□ -2
CHD9-202ENST00000398510 CTSAP10619 480 aa2.58□□□□□ -2
CHD9-202ENST00000398510 RAB3AP20336 220 aa2.58□□□□□ -2
CHD9-202ENST00000398510 RAD52P43351 418 aa2.58□□□□□ -2
CHD9-202ENST00000398510 CSN1S1P47710 185 aa2.58□□□□□ -2
CHD9-202ENST00000398510 HOXA4Q00056 320 aaPredicted RBP2.58□□□□□ -2
CHD9-202ENST00000398510 NDUFAF5Q5TEU4 345 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms