RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 PCDHGB3Q9Y5G1 929 aa13.09□□□□□ -0.31
HDDC2-202ENST00000398153 PRSS51A0A1B0GVH4 220 aa13.08□□□□□ -0.32
HDDC2-202ENST00000398153 G3V3Y1 287 aa13.08□□□□□ -0.32
HDDC2-202ENST00000398153 ZNF195O14628 629 aa13.08□□□□□ -0.32
HDDC2-202ENST00000398153 PRRG2O14669 202 aa13.08□□□□□ -0.32
HDDC2-202ENST00000398153 LRRTM2O43300 516 aa13.08□□□□□ -0.32
HDDC2-202ENST00000398153 ATP8B1O43520 1251 aa13.08□□□□□ -0.32
HDDC2-202ENST00000398153 ICOSLGO75144 302 aa13.08□□□□□ -0.32
HDDC2-202ENST00000398153 SEMA7AO75326 666 aa13.08□□□□□ -0.32
HDDC2-202ENST00000398153 IL33O95760 270 aa13.08□□□□□ -0.32
HDDC2-202ENST00000398153 ABOP16442 354 aa13.08□□□□□ -0.32
HDDC2-202ENST00000398153 PTGS2P35354 604 aa13.08□□□□□ -0.32
HDDC2-202ENST00000398153 MASP1P48740 699 aa13.08□□□□□ -0.32
HDDC2-202ENST00000398153 CCT3P49368 545 aaKnown RBP13.08□□□□□ -0.32
HDDC2-202ENST00000398153 CDK9P50750 372 aaKnown RBP13.08□□□□□ -0.32
HDDC2-202ENST00000398153 IRX1P78414 480 aaPredicted RBP13.08□□□□□ -0.32
HDDC2-202ENST00000398153 GAB1Q13480 694 aa13.08□□□□□ -0.32
HDDC2-202ENST00000398153 PGS1Q32NB8 556 aa13.08□□□□□ -0.32
HDDC2-202ENST00000398153 MFSD12Q6NUT3 480 aa13.08□□□□□ -0.32
HDDC2-202ENST00000398153 EPGNQ6UW88 154 aa13.08□□□□□ -0.32
HDDC2-202ENST00000398153 RNF138Q8WVD3 245 aa13.08□□□□□ -0.32
HDDC2-202ENST00000398153 CKAP2Q8WWK9 683 aa13.08□□□□□ -0.32
HDDC2-202ENST00000398153 STON2Q8WXE9 905 aa13.08□□□□□ -0.32
HDDC2-202ENST00000398153 ADOQ96SZ5 270 aa13.08□□□□□ -0.32
HDDC2-202ENST00000398153 STACQ99469 402 aa13.08□□□□□ -0.32
HDDC2-202ENST00000398153 OSBPL11Q9BXB4 747 aa13.08□□□□□ -0.32
HDDC2-202ENST00000398153 WDR55Q9H6Y2 383 aaPredicted RBP13.08□□□□□ -0.32
HDDC2-202ENST00000398153 DUSP22Q9NRW4 184 aa13.08□□□□□ -0.32
HDDC2-202ENST00000398153 ZCCHC3Q9NUD5 404 aaKnown RBP13.08□□□□□ -0.32
HDDC2-202ENST00000398153 FAM120CQ9NX05 1096 aaKnown RBP13.08□□□□□ -0.32
HDDC2-202ENST00000398153 KLRF1Q9NZS2 232 aa13.08□□□□□ -0.32
HDDC2-202ENST00000398153 ERRFI1Q9UJM3 462 aaPredicted RBP13.08□□□□□ -0.32
HDDC2-202ENST00000398153 ABCG2Q9UNQ0 655 aa13.08□□□□□ -0.32
HDDC2-202ENST00000398153 GPR45Q9Y5Y3 372 aa13.08□□□□□ -0.32
HDDC2-202ENST00000398153 USH1CQ9Y6N9 552 aa13.08□□□□□ -0.32
HDDC2-202ENST00000398153 HIVEP3Q5T1R4 2406 aa13.07□□□□□ -0.32
HDDC2-202ENST00000398153 PRAMEF25A6NGN4 478 aa13.07□□□□□ -0.32
HDDC2-202ENST00000398153 LRRC3CA6NJW4 275 aa13.07□□□□□ -0.32
HDDC2-202ENST00000398153 FAM166BA8MTA8 275 aa13.07□□□□□ -0.32
HDDC2-202ENST00000398153 E9PBE3 544 aa13.07□□□□□ -0.32
HDDC2-202ENST00000398153 AQP7O14520 342 aa13.07□□□□□ -0.32
HDDC2-202ENST00000398153 CFLARO15519 480 aa13.07□□□□□ -0.32
HDDC2-202ENST00000398153 CBR3O75828 277 aa13.07□□□□□ -0.32
HDDC2-202ENST00000398153 ALOX5P09917 674 aa13.07□□□□□ -0.32
HDDC2-202ENST00000398153 ALDOCP09972 364 aaKnown RBP13.07□□□□□ -0.32
HDDC2-202ENST00000398153 MAGEA5P43359 124 aa13.07□□□□□ -0.32
HDDC2-202ENST00000398153 CLK3P49761 638 aaKnown RBP13.07□□□□□ -0.32
HDDC2-202ENST00000398153 PRKAG1P54619 331 aa13.07□□□□□ -0.32
HDDC2-202ENST00000398153 PDCD4Q53EL6 469 aaKnown RBP13.07□□□□□ -0.32
HDDC2-202ENST00000398153 HSP90B2PQ58FF3 399 aa13.07□□□□□ -0.32
HDDC2-202ENST00000398153 EXOSC6Q5RKV6 272 aaKnown RBP13.07□□□□□ -0.32
HDDC2-202ENST00000398153 TIGD3Q6B0B8 471 aa13.07□□□□□ -0.32
HDDC2-202ENST00000398153 ACAD11Q709F0 780 aa13.07□□□□□ -0.32
HDDC2-202ENST00000398153 TRILQ7L0X0 811 aa13.07□□□□□ -0.32
HDDC2-202ENST00000398153 CHERPQ8IWX8 916 aaKnown RBP13.07□□□□□ -0.32
HDDC2-202ENST00000398153 ARFGAP2Q8N6H7 521 aa13.07□□□□□ -0.32
HDDC2-202ENST00000398153 OR4N2Q8NGD1 307 aa13.07□□□□□ -0.32
HDDC2-202ENST00000398153 OR1J4Q8NGS1 313 aa13.07□□□□□ -0.32
HDDC2-202ENST00000398153 FAM57AQ8TBR7 257 aa13.07□□□□□ -0.32
HDDC2-202ENST00000398153 GPR151Q8TDV0 419 aa13.07□□□□□ -0.32
HDDC2-202ENST00000398153 NODALQ96S42 347 aa13.07□□□□□ -0.32
HDDC2-202ENST00000398153 ZBTB18Q99592 522 aa13.07□□□□□ -0.32
HDDC2-202ENST00000398153 ACTRT3Q9BYD9 372 aa13.07□□□□□ -0.32
HDDC2-202ENST00000398153 DEFB127Q9H1M4 99 aa13.07□□□□□ -0.32
HDDC2-202ENST00000398153 UBQLN3Q9H347 655 aa13.07□□□□□ -0.32
HDDC2-202ENST00000398153 MED4Q9NPJ6 270 aa13.07□□□□□ -0.32
HDDC2-202ENST00000398153 SDHAF3Q9NRP4 125 aa13.07□□□□□ -0.32
HDDC2-202ENST00000398153 SUCOQ9UBS9 1254 aaKnown RBP13.07□□□□□ -0.32
HDDC2-202ENST00000398153 SNX8Q9Y5X2 465 aa13.07□□□□□ -0.32
HDDC2-202ENST00000398153 NINQ8N4C6 2090 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 TRGV8A0A0C4DH27 118 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 GOLGA8QA0A0J9YX86 632 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 A0A1B0GTH9 108 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 GOLGA8OA6NCC3 632 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 DUXAA6NLW8 204 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 GOLGA8NF8WBI6 632 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 BCKDKO14874 412 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 SNPHO15079 494 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 UBDO15205 165 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 CDC40O60508 579 aaKnown RBP eCLIP13.06□□□□□ -0.32
HDDC2-202ENST00000398153 SCN2BO60939 215 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 WISP2O76076 250 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 C6orf47O95873 294 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 LDLRP01130 860 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 HMGN2P05204 90 aaKnown RBP13.06□□□□□ -0.32
HDDC2-202ENST00000398153 IL6P05231 212 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 HPNP05981 417 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 NGFRP08138 427 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 S100A3P33764 101 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 GABRA3P34903 492 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 PTGDSP41222 190 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 MRPL19P49406 292 aaKnown RBP13.06□□□□□ -0.32
HDDC2-202ENST00000398153 WNT3P56703 355 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 HBA1P69905 142 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 TP53BP2Q13625 1128 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.06□□□□□ -0.32
HDDC2-202ENST00000398153 SPDYE7PQ495Y7 208 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 SLC9B1Q4ZJI4 515 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 FNDC7Q5VTL7 733 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 NXNQ6DKJ4 435 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms