RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 M0R3H8 397 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 EEDO75530 441 aaKnown RBP10.75□□□□□ -0.69
TTC28-201ENST00000397906 RPS5P46782 204 aaKnown RBP10.75□□□□□ -0.69
TTC28-201ENST00000397906 TAP2Q03519 686 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 LINC00696Q6ZRV3 163 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 TM9SF4Q92544 642 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 CCDC86Q9H6F5 360 aaKnown RBP10.75□□□□□ -0.69
TTC28-201ENST00000397906 DYNLRB1Q9NP97 96 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 PCDHGA10Q9Y5H3 936 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 SIGLEC6O43699 453 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 SNAP29O95721 258 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 RHCEP18577 417 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 SYNPOQ8N3V7 929 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 C15orf40Q8WUR7 153 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 NAT6Q93015 286 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 PAPOLGQ9BWT3 736 aaKnown RBP10.74□□□□□ -0.69
TTC28-201ENST00000397906 PREBQ9HCU5 417 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 CNIH4Q9P003 139 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 PLSCR5A0PG75 271 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 EDN1P05305 212 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 ATP4BP51164 291 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 ZNF619Q8N2I2 560 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 TMIEQ8NEW7 156 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 SPEF1Q9Y4P9 236 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 ALG5Q9Y673 324 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 PRSS21Q9Y6M0 314 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 RAC2P15153 192 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 HOXD9P28356 352 aaPredicted RBP10.74□□□□□ -0.69
TTC28-201ENST00000397906 PSMA6P60900 246 aaKnown RBP10.74□□□□□ -0.69
TTC28-201ENST00000397906 HYAL4Q2M3T9 481 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 ARHGAP11AQ6P4F7 1023 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 MFSD6LQ8IWD5 586 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 ELMOD2Q8IZ81 293 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 EDAQ92838 391 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 FAM71F1Q96KD3 344 aaPredicted RBP10.74□□□□□ -0.69
TTC28-201ENST00000397906 LRR1Q96L50 414 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 HOXD1Q9GZZ0 328 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 KLF11O14901 512 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 VASPP50552 380 aaPredicted RBP10.74□□□□□ -0.69
TTC28-201ENST00000397906 METTL2BQ6P1Q9 378 aaKnown RBP10.74□□□□□ -0.69
TTC28-201ENST00000397906 DPY19L4Q7Z388 723 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 BMFQ96LC9 184 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 NUDT22Q9BRQ3 303 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 ADAMTS6Q9UKP5 1117 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 KIAA0355O15063 1070 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 BDH1Q02338 343 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 SERTAD2Q14140 314 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 H0YJX3 145 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 CSF2P04141 144 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 MAGEA3P43357 314 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 ACTC1P68032 377 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 ACTA1P68133 377 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 CD200R1Q8TD46 325 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 TREM1Q9NP99 234 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 NENFQ9UMX5 172 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 LINC01553A4QN01 128 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 EEF1E1O43324 174 aaKnown RBP10.74□□□□□ -0.69
TTC28-201ENST00000397906 SYT7O43581 403 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 AK1P00568 194 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 CD46P15529 392 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 ACTA2P62736 377 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 ACTG2P63267 376 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 NADK2Q4G0N4 442 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 PARM1Q6UWI2 310 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 DCDC5Q6ZRR9 648 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 PDLIM7Q9NR12 457 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 ANKRD10Q9NXR5 420 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 H3BSA7 217 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 LETMD1Q6P1Q0 360 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 CUTCQ9NTM9 273 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 YARS2Q9Y2Z4 477 aaKnown RBP10.74□□□□□ -0.69
TTC28-201ENST00000397906 HTR3BO95264 441 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 C8BP07358 591 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 RPL19P84098 196 aaKnown RBP10.74□□□□□ -0.69
TTC28-201ENST00000397906 POU4F2Q12837 409 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 PRAMEF20Q5VT98 475 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 ZNF160Q9HCG1 818 aa10.74□□□□□ -0.69
TTC28-201ENST00000397906 ADAMTS4O75173 837 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 SF3B4Q15427 424 aaKnown RBP eCLIP10.73□□□□□ -0.692e-6■■□□□ 13.9
TTC28-201ENST00000397906 GCDHQ92947 438 aaPredicted RBP10.73□□□□□ -0.69
TTC28-201ENST00000397906 DMRT3Q9NQL9 472 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 CUEDC1Q9NWM3 386 aaPredicted RBP10.73□□□□□ -0.69
TTC28-201ENST00000397906 EXTL2Q9UBQ6 330 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 PCTPQ9UKL6 214 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 ZNF829Q3KNS6 432 aaPredicted RBP10.73□□□□□ -0.69
TTC28-201ENST00000397906 ARHGAP12Q8IWW6 846 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 OR5J2Q8NH18 312 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 ENTPD2Q9Y5L3 495 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 IL32P24001 234 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 KANSL1Q7Z3B3 1105 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 TRIM46Q7Z4K8 759 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 ACOT4Q8N9L9 421 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 SLC6A18Q96N87 628 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 SRPK3Q9UPE1 567 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 LRRN3E7EW58 273 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 ANKRD28O15084 1053 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 TNFSF12O43508 249 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 HTR6P50406 440 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms