RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 SLAMF1Q13291 335 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 SELPLGQ14242 412 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 SMAD1Q15797 465 aaKnown RBP5.5□□□□□ -1.53
PTPRD-206ENST00000397617 MINDY4Q4G0A6 757 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 OR14A16Q8NHC5 309 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 ARSGQ96EG1 525 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.5□□□□□ -1.53
PTPRD-206ENST00000397617 TMEM14AQ9Y6G1 99 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 ARID1AO14497 2285 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 OR6C76A6NM76 312 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 CYR61O00622 381 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 CDK1P06493 297 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 CTSEP14091 401 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 GPR143P51810 404 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 LIMK1P53667 647 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 ARHGEF39Q8N4T4 335 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 TEX19Q8NA77 164 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 ST13P5Q8NFI4 369 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-206ENST00000397617 SLC35A4Q96G79 324 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 FERD3LQ96RJ6 166 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 CRNNQ9UBG3 495 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-206ENST00000397617 SERGEFQ9UGK8 458 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 TDRKHQ9Y2W6 561 aaKnown RBP5.49□□□□□ -1.53
PTPRD-206ENST00000397617 MAP4K5Q9Y4K4 846 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 TMEM150CB9EJG8 249 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 NRG2O14511 850 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-206ENST00000397617 ALPPP05187 535 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 INHBBP09529 407 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 ETFAP13804 333 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 MSX1P28360 303 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 FAM189A2Q15884 450 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 SLC15A4Q8N697 577 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 PSD4Q8NDX1 1056 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 FAM71CQ8NEG0 241 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 CCDC54Q8NEL0 328 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 OR10G6Q8NH81 332 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 FAM110BQ8TC76 370 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 GAB3Q8WWW8 586 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 WDR54Q9H977 334 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 CD84Q9UIB8 345 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 COL5A1P20908 1838 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-206ENST00000397617 POM121BA6NF01 834 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 PCDHGA12O60330 932 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 GNSP15586 552 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 GLB1P16278 677 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 HTR3AP46098 478 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 XKP51811 444 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 FZD2Q14332 565 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 LRRC36Q1X8D7 754 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 ZNF793Q6ZN11 406 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 ADCK2Q7Z695 626 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 ZFHX2Q9C0A1 2572 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-206ENST00000397617 KRT87PA6NCN2 255 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 TTLL8A6PVC2 850 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 TRAPPC2P0DI81 140 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 TRAPPC2BP0DI82 140 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 HSD11B2P80365 405 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 SHC2P98077 582 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 C14orf28Q4W4Y0 310 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 XAF1Q6GPH4 301 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 D2HGDHQ8N465 521 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 ZNF527Q8NB42 609 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 ZNF559Q9BR84 538 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 INPP5KQ9BT40 448 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 FNDC11Q9BVV2 318 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 ADAP2Q9NPF8 381 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 ACOT13Q9NPJ3 140 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 MBNL1Q9NR56 388 aaKnown RBP5.49□□□□□ -1.53
PTPRD-206ENST00000397617 CDV3Q9UKY7 258 aaKnown RBP5.49□□□□□ -1.53
PTPRD-206ENST00000397617 ATG4BQ9Y4P1 393 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 RHPN2P1A8MT19 583 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 CCRL2O00421 344 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 SLC31A1O15431 190 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 PIAS2O75928 621 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 IFNGP01579 166 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 TIE1P35590 1138 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 AVPR1BP47901 424 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 GABRA4P48169 554 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 GPR18Q14330 331 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 PUM1Q14671 1186 aaKnown RBP eCLIP5.49□□□□□ -1.53
PTPRD-206ENST00000397617 GTDC1Q4AE62 458 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 ZNF628Q5EBL2 1059 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 Q6ZSR6 202 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 TSEN54Q7Z6J9 526 aaKnown RBP5.49□□□□□ -1.53
PTPRD-206ENST00000397617 RBM23Q86U06 439 aaKnown RBP5.49□□□□□ -1.53
PTPRD-206ENST00000397617 EID2Q8N6I1 236 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 RNF138Q8WVD3 245 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 SEMA4CQ9C0C4 833 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 KCNN2Q9H2S1 579 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 SLAMF7Q9NQ25 335 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 HRASLS2Q9NWW9 162 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 SH3GLB1Q9Y371 365 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 DUX1O43812 170 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 GP1BAP07359 652 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 UGT2B7P16662 529 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 F8A1P23610 371 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 ACSL1P33121 698 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 CDKN2CP42773 168 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 ATP12AP54707 1039 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 ARHGAP11AQ6P4F7 1023 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms