RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 CFL2Q9Y281 166 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 LOC102723996A0A087X1L8 192 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 SOCS6O14544 535 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 ZIC2O95409 532 aaPredicted RBP19.63■□□□□ 0.73
CPNE1-204ENST00000397443 ATP6V1G2O95670 118 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 CELA2AP08217 269 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 CD82P27701 267 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 GNA13Q14344 377 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 GPR68Q15743 365 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 ARHGAP11BQ3KRB8 267 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 HSDL2Q6YN16 418 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 PPP1R32Q7Z5V6 425 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 PRR22Q8IZ63 422 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 ADGRG5Q8IZF4 528 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 SLCO4A1Q96BD0 722 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 ZG16BQ96DA0 208 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 GPR87Q9BY21 358 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 WWTR1Q9GZV5 400 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 SLC38A1Q9H2H9 487 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 ANAPC2Q9UJX6 822 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 GPR55Q9Y2T6 319 aaPredicted RBP19.63■□□□□ 0.73
CPNE1-204ENST00000397443 WDR45Q9Y484 360 aa19.63■□□□□ 0.73
CPNE1-204ENST00000397443 NPIPA5A0A0B4J1W7 369 aa19.62■□□□□ 0.73
CPNE1-204ENST00000397443 NPIPA7E9PJI5 369 aa19.62■□□□□ 0.73
CPNE1-204ENST00000397443 TERTO14746 1132 aaKnown RBP19.62■□□□□ 0.73
CPNE1-204ENST00000397443 KCNK2O95069 426 aa19.62■□□□□ 0.73
CPNE1-204ENST00000397443 BAG2O95816 211 aa19.62■□□□□ 0.73
CPNE1-204ENST00000397443 NPIPA8P0DM63 369 aa19.62■□□□□ 0.73
CPNE1-204ENST00000397443 RNF144AP50876 292 aaPredicted RBP19.62■□□□□ 0.73
CPNE1-204ENST00000397443 NR0B1P51843 470 aaKnown RBP19.62■□□□□ 0.73
CPNE1-204ENST00000397443 SSPNQ14714 243 aa19.62■□□□□ 0.73
CPNE1-204ENST00000397443 C16orf47Q6ZP98 133 aaPredicted RBP19.62■□□□□ 0.73
CPNE1-204ENST00000397443 FKBP9P1Q75LS8 142 aa19.62■□□□□ 0.73
CPNE1-204ENST00000397443 PATL1Q86TB9 770 aaKnown RBP19.62■□□□□ 0.73
CPNE1-204ENST00000397443 VMP1Q96GC9 406 aa19.62■□□□□ 0.73
CPNE1-204ENST00000397443 RNF145Q96MT1 663 aa19.62■□□□□ 0.73
CPNE1-204ENST00000397443 GPN2Q9H9Y4 310 aaPredicted RBP19.62■□□□□ 0.73
CPNE1-204ENST00000397443 ZNF160Q9HCG1 818 aa19.62■□□□□ 0.73
CPNE1-204ENST00000397443 ADPRHL2Q9NX46 363 aa19.62■□□□□ 0.73
CPNE1-204ENST00000397443 NKX1-2Q9UD57 310 aaPredicted RBP19.62■□□□□ 0.73
CPNE1-204ENST00000397443 SAMD4AQ9UPU9 718 aaKnown RBP19.62■□□□□ 0.73
CPNE1-204ENST00000397443 NINQ8N4C6 2090 aa19.62■□□□□ 0.73
CPNE1-204ENST00000397443 RNF4P78317 190 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 MTX3Q5HYI7 312 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 CRB2Q5IJ48 1285 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 TBCELQ5QJ74 424 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 CCDC80Q76M96 950 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 ZAR1Q86SH2 424 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 VASH2Q86V25 355 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 DTX1Q86Y01 620 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 BBS10Q8TAM1 723 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 HOXB13Q92826 284 aaPredicted RBP19.61■□□□□ 0.73
CPNE1-204ENST00000397443 ADIPOR1Q96A54 375 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 HSH2DQ96JZ2 352 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 BTBD9Q96Q07 612 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 ZNF607Q96SK3 696 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 ZNF700Q9H0M5 742 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 KCND3Q9UK17 655 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 RPS6KA6Q9UK32 745 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 CBLCQ9ULV8 474 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 AP4S1Q9Y587 144 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 NSG1A0A0A6YYJ2 146 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.61■□□□□ 0.73
CPNE1-204ENST00000397443 SUV39H1O43463 412 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 FKBP6O75344 327 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 IGKV1D-16P01601 117 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 IGHEP01854 428 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 TNFRSF1BP20333 461 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 PPICP45877 212 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 AP2B1P63010 937 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 FRRS1Q6ZNA5 592 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 LRRC74BQ6ZQY2 392 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 CBLL1Q75N03 491 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 KRT73Q86Y46 540 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 ARMC8Q8IUR7 673 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 METTL25Q8N6Q8 603 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 ZSCAN1Q8NBB4 408 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 EFHD2Q96C19 240 aaPredicted RBP19.61■□□□□ 0.73
CPNE1-204ENST00000397443 SLC47A1Q96FL8 570 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 LCORQ96JN0 433 aaPredicted RBP19.61■□□□□ 0.73
CPNE1-204ENST00000397443 SEMA4CQ9C0C4 833 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 SEC14L3Q9UDX4 400 aa19.61■□□□□ 0.73
CPNE1-204ENST00000397443 A0A0G2JPF8 293 aa19.6■□□□□ 0.73
CPNE1-204ENST00000397443 HNRNPCL2B2RXH8 293 aa19.6■□□□□ 0.73
CPNE1-204ENST00000397443 HNRNPCL3B7ZW38 293 aa19.6■□□□□ 0.73
CPNE1-204ENST00000397443 H3BNX3 289 aa19.6■□□□□ 0.73
CPNE1-204ENST00000397443 STX11O75558 287 aa19.6■□□□□ 0.73
CPNE1-204ENST00000397443 HNRNPCL4P0DMR1 293 aa19.6■□□□□ 0.73
CPNE1-204ENST00000397443 TRHRP34981 398 aaPredicted RBP19.6■□□□□ 0.73
CPNE1-204ENST00000397443 SESN3P58005 492 aa19.6■□□□□ 0.73
CPNE1-204ENST00000397443 RTP5Q14D33 572 aa19.6■□□□□ 0.73
CPNE1-204ENST00000397443 TYW3Q6IPR3 259 aaKnown RBP19.6■□□□□ 0.73
CPNE1-204ENST00000397443 EIF3MQ7L2H7 374 aaKnown RBP19.6■□□□□ 0.73
CPNE1-204ENST00000397443 BCORP1Q8N888 145 aa19.6■□□□□ 0.73
CPNE1-204ENST00000397443 CHDHQ8NE62 594 aaPredicted RBP19.6■□□□□ 0.73
CPNE1-204ENST00000397443 KIAA1143Q96AT1 154 aaPredicted RBP19.6■□□□□ 0.73
CPNE1-204ENST00000397443 NAF1Q96HR8 494 aaKnown RBP19.6■□□□□ 0.73
CPNE1-204ENST00000397443 PYURFQ96I23 114 aa19.6■□□□□ 0.73
CPNE1-204ENST00000397443 SCNM1Q9BWG6 230 aa19.6■□□□□ 0.73
CPNE1-204ENST00000397443 CALML5Q9NZT1 146 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms