RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 CXorf36Q9H7Y0 433 aa23.28■■□□□ 1.32
TSPAN4-207ENST00000397411 ZFP64Q9NPA5 681 aa23.28■■□□□ 1.32
TSPAN4-207ENST00000397411 STX1BP61266 288 aa23.27■■□□□ 1.32
TSPAN4-207ENST00000397411 HBA1P69905 142 aa23.27■■□□□ 1.32
TSPAN4-207ENST00000397411 PDCD4Q53EL6 469 aaKnown RBP23.27■■□□□ 1.32
TSPAN4-207ENST00000397411 BICRALQ6AI39 1079 aa23.27■■□□□ 1.32
TSPAN4-207ENST00000397411 DESI1Q6ICB0 168 aa23.27■■□□□ 1.32
TSPAN4-207ENST00000397411 SIAH3Q8IW03 269 aa23.27■■□□□ 1.32
TSPAN4-207ENST00000397411 MIER2Q8N344 545 aa23.27■■□□□ 1.32
TSPAN4-207ENST00000397411 GLB1L3Q8NCI6 653 aaPredicted RBP23.27■■□□□ 1.32
TSPAN4-207ENST00000397411 OR52N2Q8NGI0 321 aa23.27■■□□□ 1.32
TSPAN4-207ENST00000397411 FBXO30Q8TB52 745 aa23.27■■□□□ 1.32
TSPAN4-207ENST00000397411 THOC1Q96FV9 657 aaKnown RBP23.27■■□□□ 1.32
TSPAN4-207ENST00000397411 SLC35A4Q96G79 324 aa23.27■■□□□ 1.32
TSPAN4-207ENST00000397411 C16orf58Q96GQ5 468 aa23.27■■□□□ 1.32
TSPAN4-207ENST00000397411 ZNF597Q96LX8 424 aa23.27■■□□□ 1.32
TSPAN4-207ENST00000397411 NODALQ96S42 347 aa23.27■■□□□ 1.32
TSPAN4-207ENST00000397411 CCDC28BQ9BUN5 200 aa23.27■■□□□ 1.32
TSPAN4-207ENST00000397411 FAM120CQ9NX05 1096 aaKnown RBP23.27■■□□□ 1.32
TSPAN4-207ENST00000397411 B4GALT7Q9UBV7 327 aa23.27■■□□□ 1.32
TSPAN4-207ENST00000397411 TSPAN2O60636 221 aa23.26■■□□□ 1.31
TSPAN4-207ENST00000397411 WISP2O76076 250 aa23.26■■□□□ 1.31
TSPAN4-207ENST00000397411 HMGN2P05204 90 aaKnown RBP23.26■■□□□ 1.31
TSPAN4-207ENST00000397411 KRT16P08779 473 aa23.26■■□□□ 1.31
TSPAN4-207ENST00000397411 DGKQP52824 942 aa23.26■■□□□ 1.31
TSPAN4-207ENST00000397411 WNT3P56703 355 aa23.26■■□□□ 1.31
TSPAN4-207ENST00000397411 LASP1Q14847 261 aaKnown RBP23.26■■□□□ 1.31
TSPAN4-207ENST00000397411 MFSD12Q6NUT3 480 aa23.26■■□□□ 1.31
TSPAN4-207ENST00000397411 SLC30A6Q6NXT4 461 aa23.26■■□□□ 1.31
TSPAN4-207ENST00000397411 OR5AK3PQ8NH89 298 aa23.26■■□□□ 1.31
TSPAN4-207ENST00000397411 PSMA8Q8TAA3 256 aa23.26■■□□□ 1.31
TSPAN4-207ENST00000397411 SFXN5Q8TD22 340 aa23.26■■□□□ 1.31
TSPAN4-207ENST00000397411 PIK3R3Q92569 461 aa23.26■■□□□ 1.31
TSPAN4-207ENST00000397411 RMND5BQ96G75 393 aaPredicted RBP23.26■■□□□ 1.31
TSPAN4-207ENST00000397411 TEX37Q96LM6 180 aa23.26■■□□□ 1.31
TSPAN4-207ENST00000397411 OR52E6Q96RD3 313 aa23.26■■□□□ 1.31
TSPAN4-207ENST00000397411 PROK2Q9HC23 129 aa23.26■■□□□ 1.31
TSPAN4-207ENST00000397411 GIMAP1-GIMAP5A0A087WTJ2 511 aa23.25■■□□□ 1.31
TSPAN4-207ENST00000397411 GXYLT2A0PJZ3 443 aa23.25■■□□□ 1.31
TSPAN4-207ENST00000397411 PRAMEF25A6NGN4 478 aa23.25■■□□□ 1.31
TSPAN4-207ENST00000397411 C9JVG2 144 aa23.25■■□□□ 1.31
TSPAN4-207ENST00000397411 EDF1O60869 148 aaKnown RBP23.25■■□□□ 1.31
TSPAN4-207ENST00000397411 CASP6P55212 293 aa23.25■■□□□ 1.31
TSPAN4-207ENST00000397411 FOXO1Q12778 655 aa23.25■■□□□ 1.31
TSPAN4-207ENST00000397411 SLC10A1Q14973 349 aa23.25■■□□□ 1.31
TSPAN4-207ENST00000397411 FAM109AQ8N4B1 249 aa23.25■■□□□ 1.31
TSPAN4-207ENST00000397411 TMEM251Q8N6I4 163 aa23.25■■□□□ 1.31
TSPAN4-207ENST00000397411 ADAMTS15Q8TE58 950 aa23.25■■□□□ 1.31
TSPAN4-207ENST00000397411 GIMAP5Q96F15 307 aa23.25■■□□□ 1.31
TSPAN4-207ENST00000397411 EBF4Q9BQW3 602 aa23.25■■□□□ 1.31
TSPAN4-207ENST00000397411 OSBPL11Q9BXB4 747 aa23.25■■□□□ 1.31
TSPAN4-207ENST00000397411 ACTRT3Q9BYD9 372 aa23.25■■□□□ 1.31
TSPAN4-207ENST00000397411 LDAHQ9H6V9 325 aa23.25■■□□□ 1.31
TSPAN4-207ENST00000397411 EXO5Q9H790 373 aa23.25■■□□□ 1.31
TSPAN4-207ENST00000397411 NPHS2Q9NP85 383 aa23.25■■□□□ 1.31
TSPAN4-207ENST00000397411 ZIM2Q9NZV7 527 aa23.25■■□□□ 1.31
TSPAN4-207ENST00000397411 ICOSLGO75144 302 aa23.24■■□□□ 1.31
TSPAN4-207ENST00000397411 GLSO94925 669 aaPredicted RBP23.24■■□□□ 1.31
TSPAN4-207ENST00000397411 NKX2-2O95096 273 aa23.24■■□□□ 1.31
TSPAN4-207ENST00000397411 IL6P05231 212 aa23.24■■□□□ 1.31
TSPAN4-207ENST00000397411 VIMP08670 466 aaKnown RBP23.24■■□□□ 1.31
TSPAN4-207ENST00000397411 ACP2P11117 423 aa23.24■■□□□ 1.31
TSPAN4-207ENST00000397411 ABOP16442 354 aa23.24■■□□□ 1.31
TSPAN4-207ENST00000397411 IL12AP29459 219 aa23.24■■□□□ 1.31
TSPAN4-207ENST00000397411 MAGEA5P43359 124 aa23.24■■□□□ 1.31
TSPAN4-207ENST00000397411 CLK3P49761 638 aaKnown RBP23.24■■□□□ 1.31
TSPAN4-207ENST00000397411 PHC1P78364 1004 aa23.24■■□□□ 1.31
TSPAN4-207ENST00000397411 SNTA1Q13424 505 aa23.24■■□□□ 1.31
TSPAN4-207ENST00000397411 TOMM20Q15388 145 aa23.24■■□□□ 1.31
TSPAN4-207ENST00000397411 CMPK2Q5EBM0 449 aa23.24■■□□□ 1.31
TSPAN4-207ENST00000397411 COX18Q8N8Q8 333 aa23.24■■□□□ 1.31
TSPAN4-207ENST00000397411 SLC16A11Q8NCK7 471 aa23.24■■□□□ 1.31
TSPAN4-207ENST00000397411 DCTN4Q9UJW0 460 aa23.24■■□□□ 1.31
TSPAN4-207ENST00000397411 RNF103-CHMP3A0A140T963 221 aa23.23■■□□□ 1.31
TSPAN4-207ENST00000397411 C2orf72A6NCS6 295 aa23.23■■□□□ 1.31
TSPAN4-207ENST00000397411 GNB5O14775 395 aa23.23■■□□□ 1.31
TSPAN4-207ENST00000397411 TRIM3O75382 744 aaPredicted RBP23.23■■□□□ 1.31
TSPAN4-207ENST00000397411 SOX30O94993 753 aa23.23■■□□□ 1.31
TSPAN4-207ENST00000397411 AGFG2O95081 481 aa23.23■■□□□ 1.31
TSPAN4-207ENST00000397411 IL33O95760 270 aa23.23■■□□□ 1.31
TSPAN4-207ENST00000397411 PGRP06401 933 aa23.23■■□□□ 1.31
TSPAN4-207ENST00000397411 CYP4B1P13584 511 aa23.23■■□□□ 1.31
TSPAN4-207ENST00000397411 UQCRC2P22695 453 aa23.23■■□□□ 1.31
TSPAN4-207ENST00000397411 GDF1P27539 372 aa23.23■■□□□ 1.31
TSPAN4-207ENST00000397411 HSF1Q00613 529 aa23.23■■□□□ 1.31
TSPAN4-207ENST00000397411 LRRC74AQ0VAA2 488 aa23.23■■□□□ 1.31
TSPAN4-207ENST00000397411 HYAL4Q2M3T9 481 aa23.23■■□□□ 1.31
TSPAN4-207ENST00000397411 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.23■■□□□ 1.31
TSPAN4-207ENST00000397411 ANGPTL8Q6UXH0 198 aa23.23■■□□□ 1.31
TSPAN4-207ENST00000397411 C6orf120Q7Z4R8 191 aa23.23■■□□□ 1.31
TSPAN4-207ENST00000397411 OR1J4Q8NGS1 313 aa23.23■■□□□ 1.31
TSPAN4-207ENST00000397411 OTUB1Q96FW1 271 aaPredicted RBP23.23■■□□□ 1.31
TSPAN4-207ENST00000397411 SDR39U1Q9NRG7 319 aaPredicted RBP23.23■■□□□ 1.31
TSPAN4-207ENST00000397411 PCDHGB3Q9Y5G1 929 aa23.23■■□□□ 1.31
TSPAN4-207ENST00000397411 HELZ2Q9BYK8 2649 aaKnown RBP23.23■■□□□ 1.31
TSPAN4-207ENST00000397411 TRGV8A0A0C4DH27 118 aa23.22■■□□□ 1.31
TSPAN4-207ENST00000397411 TRAPPC6AO75865 159 aa23.22■■□□□ 1.31
TSPAN4-207ENST00000397411 CHI3L1P36222 383 aaPredicted RBP23.22■■□□□ 1.31
TSPAN4-207ENST00000397411 POLR2JP52435 117 aaKnown RBP23.22■■□□□ 1.31
TSPAN4-207ENST00000397411 GUCY1A3Q02108 690 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms