RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 SYT5O00445 386 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 TO15178 435 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 PEX1O43933 1283 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 DEAF1O75398 565 aaPredicted RBP12.62□□□□□ -0.39
MCF2L-209ENST00000397036 ZNF682O95780 498 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 CD247P20963 164 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 LCN1P31025 176 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 PIGAP37287 484 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 CLDN6P56747 220 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 HPCAP84074 193 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 KCNC4Q03721 635 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 CHRNEQ04844 493 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 IFI44LQ53G44 452 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 SFT2D3Q587I9 215 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 DCST2Q5T1A1 773 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 FAM199XQ6PEV8 388 aaPredicted RBP12.62□□□□□ -0.39
MCF2L-209ENST00000397036 FRRS1Q6ZNA5 592 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 CPEB2Q7Z5Q1 589 aaKnown RBP12.62□□□□□ -0.39
MCF2L-209ENST00000397036 ZSCAN1Q8NBB4 408 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 B3GNT7Q8NFL0 401 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 GPR151Q8TDV0 419 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 DOK4Q8TEW6 326 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 APOBEC4Q8WW27 367 aaKnown RBP12.62□□□□□ -0.39
MCF2L-209ENST00000397036 LRTOMTQ8WZ04 291 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 ADIPOR1Q96A54 375 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 HSH2DQ96JZ2 352 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 COL21A1Q96P44 957 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 LPAR4Q99677 370 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 WDR77Q9BQA1 342 aaPredicted RBP12.62□□□□□ -0.39
MCF2L-209ENST00000397036 BDH2Q9BUT1 245 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 EVA1AQ9H8M9 152 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 TRIM45Q9H8W5 580 aaPredicted RBP12.62□□□□□ -0.39
MCF2L-209ENST00000397036 POLR1BQ9H9Y6 1135 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 Q9N2J8 555 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 COPS7AQ9UBW8 275 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 WDR45Q9Y484 360 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 C21orf140B9A014 251 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 CLOCKO15516 846 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 TIPRLO75663 272 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 KCNK2O95069 426 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 LDLRP01130 860 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 UMODP07911 640 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 THBS1P07996 1170 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 RPS4Y1P22090 263 aaKnown RBP12.62□□□□□ -0.39
MCF2L-209ENST00000397036 VHLP40337 213 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 DUSP7Q16829 419 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.62□□□□□ -0.39
MCF2L-209ENST00000397036 ZSWIM7Q19AV6 140 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 OGFRL1Q5TC84 451 aaPredicted RBP12.62□□□□□ -0.39
MCF2L-209ENST00000397036 TYW3Q6IPR3 259 aaKnown RBP12.62□□□□□ -0.39
MCF2L-209ENST00000397036 DHRS4L2Q6PKH6 230 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 LANCL3Q6ZV70 420 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 TMPRSS7Q7RTY8 843 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 TIPARPQ7Z3E1 657 aaKnown RBP12.62□□□□□ -0.39
MCF2L-209ENST00000397036 ZDHHC21Q8IVQ6 265 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 ZNF619Q8N2I2 560 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 CATSPER1Q8NEC5 780 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 GEMIN6Q8WXD5 167 aaKnown RBP12.62□□□□□ -0.39
MCF2L-209ENST00000397036 TP53INP1Q96A56 240 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 G6PC3Q9BUM1 346 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 NUDT9Q9BW91 350 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 PINK1Q9BXM7 581 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 GPR87Q9BY21 358 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 OR8D2Q9GZM6 311 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 VCX3BQ9H321 246 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 C8orf4Q9NR00 106 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 THSD1Q9NS62 852 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 DNAJB9Q9UBS3 223 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 SEC14L3Q9UDX4 400 aa12.62□□□□□ -0.39
MCF2L-209ENST00000397036 CNOT11Q9UKZ1 510 aaKnown RBP12.62□□□□□ -0.39
MCF2L-209ENST00000397036 FRG2CA6NGY1 282 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 AGAP5A6NIR3 686 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 A8MUA0 341 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 ACOX3O15254 700 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 KIAA0513O60268 411 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 FCMRO60667 390 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 NME6O75414 186 aaPredicted RBP12.61□□□□□ -0.39
MCF2L-209ENST00000397036 ZIC2O95409 532 aaPredicted RBP12.61□□□□□ -0.39
MCF2L-209ENST00000397036 FESP07332 822 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 ITGA2P17301 1181 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 MMP11P24347 488 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 PRKAR1BP31321 381 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 NOVA1P51513 510 aaKnown RBP12.61□□□□□ -0.39
MCF2L-209ENST00000397036 GK3PQ14409 553 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 EBPQ15125 230 aaKnown RBP12.61□□□□□ -0.39
MCF2L-209ENST00000397036 RPS26P11Q5JNZ5 115 aaPredicted RBP12.61□□□□□ -0.39
MCF2L-209ENST00000397036 C3orf38Q5JPI3 329 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 HMBOX1Q6NT76 420 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 NPSR1Q6W5P4 371 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 SHISA6Q6ZSJ9 500 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 WDR53Q7Z5U6 358 aaPredicted RBP12.61□□□□□ -0.39
MCF2L-209ENST00000397036 VTCN1Q7Z7D3 282 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 GALNT10Q86SR1 603 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 PEX5LQ8IYB4 626 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 NLGN4XQ8N0W4 816 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 ZNF441Q8N8Z8 693 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 APCDD1LQ8NCL9 501 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 NLGN4YQ8NFZ3 816 aaPredicted RBP12.61□□□□□ -0.39
MCF2L-209ENST00000397036 GPR32P1Q8NGA4 272 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 SPPL2AQ8TCT8 520 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms