RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 ZNF805Q5CZA5 627 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 DESI1Q6ICB0 168 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 PAPOLGQ9BWT3 736 aaKnown RBP13.3□□□□□ -0.28
COL4A3-202ENST00000396578 ROBO1Q9Y6N7 1651 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 GRXCR2A6NFK2 248 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 MPPED1O15442 326 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 PNMTP11086 282 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 DRD2P14416 443 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 GGT1P19440 569 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 NKPD1Q17RQ9 610 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 NIPAL3Q6P499 406 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.3□□□□□ -0.28
COL4A3-202ENST00000396578 C3orf49Q96BT1 292 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 STRADBQ9C0K7 418 aa13.3□□□□□ -0.28
COL4A3-202ENST00000396578 TRAV18A0A075B6X5 111 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 MEGF11A6BM72 1044 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 ACOT7O00154 380 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 PTPRCAPQ14761 206 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 C7orf43Q8WVR3 580 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 DPH2Q9BQC3 489 aaPredicted RBP13.29□□□□□ -0.28
COL4A3-202ENST00000396578 A0A0D9SEW6 157 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 CLN5O75503 358 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 TMEM225BP0DP42 221 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 ETFAP13804 333 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 OGDHQ02218 1023 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 TTLL10Q6ZVT0 673 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 BMFQ96LC9 184 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 C1orf74Q96LT6 269 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 IL21RQ9HBE5 538 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 GPATCH2Q9NW75 528 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 PPP1R14DQ9NXH3 145 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 ATXN7L1Q9ULK2 861 aaPredicted RBP13.29□□□□□ -0.28
COL4A3-202ENST00000396578 GPR52Q9Y2T5 361 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 PLEKHM1Q9Y4G2 1056 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 SEC14L2O76054 403 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 MPC1LP0DKB6 136 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 JUPP14923 745 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 BPIP17213 487 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 HOXC8P31273 242 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 KIAA1143Q96AT1 154 aaPredicted RBP13.29□□□□□ -0.28
COL4A3-202ENST00000396578 SLC2A11Q9BYW1 496 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 MMP28Q9H239 520 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 PLEKHJ1Q9NW61 149 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 SOWAHBA6NEL2 793 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 AGPAT2O15120 278 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 CA5AP35218 305 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 AFF3P51826 1226 aaKnown RBP13.29□□□□□ -0.28
COL4A3-202ENST00000396578 SVBPQ8N300 66 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 CD99L2Q8TCZ2 262 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 OR51J1Q9H342 316 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 SERTAD4Q9NUC0 356 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 ARFGEF2Q9Y6D5 1785 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 TNFSF12O43508 249 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 GLIS1Q8NBF1 620 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 PAPD5Q8NDF8 572 aaKnown RBP13.29□□□□□ -0.28
COL4A3-202ENST00000396578 DDX1Q92499 740 aaKnown RBP13.29□□□□□ -0.28
COL4A3-202ENST00000396578 AIG1Q9NVV5 245 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 RPS26P62854 115 aaKnown RBP13.29□□□□□ -0.28
COL4A3-202ENST00000396578 EIF2B1Q14232 305 aaKnown RBP13.29□□□□□ -0.28
COL4A3-202ENST00000396578 HAVCR2Q8TDQ0 301 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 PLIN4Q96Q06 1357 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 PEBP4Q96S96 227 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 OR51E2Q9H255 320 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 KCNK12Q9HB15 430 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 PTGDR2Q9Y5Y4 395 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 ZNF701M0R085 212 aaPredicted RBP13.29□□□□□ -0.28
COL4A3-202ENST00000396578 ALDOAP04075 364 aaKnown RBP13.29□□□□□ -0.28
COL4A3-202ENST00000396578 CATSPEREQ5SY80 951 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 OR4C11Q6IEV9 310 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 HMGN2P46Q86SG4 172 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 ZNF679Q8IYX0 411 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 MR1Q95460 341 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 TMEM181Q9P2C4 612 aa13.29□□□□□ -0.28
COL4A3-202ENST00000396578 FAM208AQ9UK61 1670 aaKnown RBP13.28□□□□□ -0.28
COL4A3-202ENST00000396578 SCAF4O95104 1147 aaKnown RBP13.28□□□□□ -0.28
COL4A3-202ENST00000396578 HNRNPFP52597 415 aaKnown RBP13.28□□□□□ -0.28
COL4A3-202ENST00000396578 PRPS1P60891 318 aa13.28□□□□□ -0.28
COL4A3-202ENST00000396578 MAMDC2Q7Z304 686 aaPredicted RBP13.28□□□□□ -0.28
COL4A3-202ENST00000396578 FNDC9Q8TBE3 224 aa13.28□□□□□ -0.28
COL4A3-202ENST00000396578 FCRL3Q96P31 734 aaPredicted RBP13.28□□□□□ -0.28
COL4A3-202ENST00000396578 PRRT1Q99946 306 aa13.28□□□□□ -0.28
COL4A3-202ENST00000396578 A0A1W2PS29 197 aa13.28□□□□□ -0.28
COL4A3-202ENST00000396578 C2orf72A6NCS6 295 aa13.28□□□□□ -0.28
COL4A3-202ENST00000396578 OSMP13725 252 aa13.28□□□□□ -0.28
COL4A3-202ENST00000396578 SGSHP51688 502 aa13.28□□□□□ -0.28
COL4A3-202ENST00000396578 CLDN8P56748 225 aa13.28□□□□□ -0.28
COL4A3-202ENST00000396578 RPL23AP62750 156 aaKnown RBP13.28□□□□□ -0.28
COL4A3-202ENST00000396578 MEF2DQ14814 521 aa13.28□□□□□ -0.28
COL4A3-202ENST00000396578 CMPK2Q5EBM0 449 aa13.28□□□□□ -0.28
COL4A3-202ENST00000396578 C12orf45Q8N5I9 185 aaPredicted RBP13.28□□□□□ -0.28
COL4A3-202ENST00000396578 HUS1BQ8NHY5 278 aa13.28□□□□□ -0.28
COL4A3-202ENST00000396578 GLTPQ9NZD2 209 aa13.28□□□□□ -0.28
COL4A3-202ENST00000396578 OR6C2Q9NZP2 312 aa13.28□□□□□ -0.28
COL4A3-202ENST00000396578 ZNF223Q9UK11 482 aaPredicted RBP13.28□□□□□ -0.28
COL4A3-202ENST00000396578 RAB3DO95716 219 aa13.28□□□□□ -0.28
COL4A3-202ENST00000396578 JMJD7P0C870 316 aa13.28□□□□□ -0.28
COL4A3-202ENST00000396578 CNR2P34972 360 aa13.28□□□□□ -0.28
COL4A3-202ENST00000396578 SOX3P41225 446 aa13.28□□□□□ -0.28
COL4A3-202ENST00000396578 CX3CR1P49238 355 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms