RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 ACSF3Q4G176 576 aaPredicted RBP12.53□□□□□ -0.4
CXCL12-205ENST00000395794 ARL13AQ5H913 290 aaPredicted RBP12.53□□□□□ -0.4
CXCL12-205ENST00000395794 AAGABQ6PD74 315 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 NPSR1Q6W5P4 371 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 IFNEQ86WN2 208 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 OR2L13Q8N349 312 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 PPP1R14CQ8TAE6 165 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 TCP10LQ8TDR4 215 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 EFHD2Q96C19 240 aaPredicted RBP12.53□□□□□ -0.4
CXCL12-205ENST00000395794 NTNG2Q96CW9 530 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 ELP4Q96EB1 424 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 ZBED6CLQ96FA7 236 aaPredicted RBP12.53□□□□□ -0.4
CXCL12-205ENST00000395794 EGLN2Q96KS0 407 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 TRIB1Q96RU8 372 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 UGT2B28Q9BY64 529 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 PRDM14Q9GZV8 571 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 REEP4Q9H6H4 257 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 NPDC1Q9NQX5 325 aaPredicted RBP12.53□□□□□ -0.4
CXCL12-205ENST00000395794 SDHAF3Q9NRP4 125 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 TAS2R10Q9NYW0 307 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 SH3BP4Q9P0V3 963 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 SLC17A7Q9P2U7 560 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 DKKL1Q9UK85 242 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 DNAJC15Q9Y5T4 150 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 WIF1Q9Y5W5 379 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 PTGDR2Q9Y5Y4 395 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 TMEM114B3SHH9 223 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 UPK1AO00322 258 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 CHRNGP07510 517 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 CYP4B1P13584 511 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 TACR1P25103 407 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 TIMP3P35625 211 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 PTGDSP41222 190 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 MANFP55145 182 aaKnown RBP12.52□□□□□ -0.41
CXCL12-205ENST00000395794 HSPB3Q12988 150 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 MYBPHQ13203 477 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 PRSS53Q2L4Q9 553 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 VPS26BQ4G0F5 336 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 RFTN2Q52LD8 501 aaPredicted RBP12.52□□□□□ -0.41
CXCL12-205ENST00000395794 CES4AQ5XG92 561 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 NSUN5P2Q63ZY6 315 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 Q6ZSR9 355 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 R3HCC1LQ7Z5L2 792 aaKnown RBP12.52□□□□□ -0.41
CXCL12-205ENST00000395794 DMRTC2Q8IXT2 367 aaPredicted RBP12.52□□□□□ -0.41
CXCL12-205ENST00000395794 WDSUB1Q8N9V3 476 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 ACBD4Q8NC06 268 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 OR4K17Q8NGC6 315 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 OR4N2Q8NGD1 307 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 CEP70Q8NHQ1 597 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 AGR3Q8TD06 166 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 TWIST2Q8WVJ9 160 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 PPP3R2Q96LZ3 170 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 TSSK3Q96PN8 268 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 TREX2Q9BQ50 279 aaPredicted RBP12.52□□□□□ -0.41
CXCL12-205ENST00000395794 ZNF559Q9BR84 538 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 MECRQ9BV79 373 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 OR2B2Q9GZK3 357 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 MCCC2Q9HCC0 563 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 PPP4R1LQ9P1A2 415 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.52□□□□□ -0.41
CXCL12-205ENST00000395794 CBLCQ9ULV8 474 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 V9GYY5 206 aaPredicted RBP12.52□□□□□ -0.41
CXCL12-205ENST00000395794 LRBAP50851 2863 aa12.52□□□□□ -0.41
CXCL12-205ENST00000395794 EML6Q6ZMW3 1958 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 CD8B2A6NJW9 211 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 H0Y3Z8 333 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 PIP5K1BO14986 540 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 LSM1O15116 133 aaKnown RBP12.51□□□□□ -0.41
CXCL12-205ENST00000395794 RGS16O15492 202 aaPredicted RBP12.51□□□□□ -0.41
CXCL12-205ENST00000395794 KCNH1O95259 989 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 IFI6P09912 130 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 PRPS2P11908 318 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 IGFBP2P18065 325 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 SDC1P18827 310 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 BMP5P22003 454 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 GRK2P25098 689 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 SRD5A2P31213 254 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 EVI2BP34910 448 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 HPCAL1P37235 193 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 RPL3P39023 403 aaKnown RBP12.51□□□□□ -0.41
CXCL12-205ENST00000395794 PEX19P40855 299 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 RFX3P48380 749 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 PRKAG1P54619 331 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 PSG6Q00889 435 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 GAB1Q13480 694 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 KRT71Q3SY84 523 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 OR5M10Q6IEU7 315 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 ANKRD26P1Q6NSI1 321 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 LRIG3Q6UXM1 1119 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 ZNF551Q7Z340 670 aaPredicted RBP12.51□□□□□ -0.41
CXCL12-205ENST00000395794 SZRD1Q7Z422 152 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 LIX1LQ8IVB5 337 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 TRIM42Q8IWZ5 723 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 OR2T11Q8NH01 316 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 MTERF3Q96E29 417 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 ZNF764Q96H86 408 aaPredicted RBP12.51□□□□□ -0.41
CXCL12-205ENST00000395794 WDYHV1Q96HA8 205 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 SFXN2Q96NB2 322 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 TMEM109Q9BVC6 243 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 TUBB1Q9H4B7 451 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms