RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 GSX1Q9H4S2 264 aaPredicted RBP15.84■□□□□ 0.13
SNRPA1-202ENST00000394082 SLC35C2Q9NQQ7 365 aa15.84■□□□□ 0.13
SNRPA1-202ENST00000394082 GIMAP4Q9NUV9 329 aa15.84■□□□□ 0.13
SNRPA1-202ENST00000394082 TESMINQ9Y4I5 508 aa15.84■□□□□ 0.13
SNRPA1-202ENST00000394082 A0A1W2PNV4 684 aa15.83■□□□□ 0.12
SNRPA1-202ENST00000394082 PCDH7O60245 1069 aa15.83■□□□□ 0.12
SNRPA1-202ENST00000394082 ESRRBO95718 433 aa15.83■□□□□ 0.12
SNRPA1-202ENST00000394082 IL3P08700 152 aa15.83■□□□□ 0.12
SNRPA1-202ENST00000394082 GRK2P25098 689 aa15.83■□□□□ 0.12
SNRPA1-202ENST00000394082 DPP4P27487 766 aa15.83■□□□□ 0.12
SNRPA1-202ENST00000394082 IL12BP29460 328 aa15.83■□□□□ 0.12
SNRPA1-202ENST00000394082 CORO7P57737 925 aa15.83■□□□□ 0.12
SNRPA1-202ENST00000394082 EEFSECP57772 596 aaKnown RBP15.83■□□□□ 0.12
SNRPA1-202ENST00000394082 RAE1P78406 368 aaKnown RBP15.83■□□□□ 0.12
SNRPA1-202ENST00000394082 GANABQ14697 944 aaKnown RBP15.83■□□□□ 0.12
SNRPA1-202ENST00000394082 FAM180BQ6P0A1 224 aa15.83■□□□□ 0.12
SNRPA1-202ENST00000394082 LARP4Q71RC2 724 aaKnown RBP eCLIP15.83■□□□□ 0.125e-6■□□□□ 10.3
SNRPA1-202ENST00000394082 LRRC75A-AS1Q8N1F1 130 aa15.83■□□□□ 0.12
SNRPA1-202ENST00000394082 CDYL2Q8N8U2 506 aa15.83■□□□□ 0.12
SNRPA1-202ENST00000394082 FADS6Q8N9I5 356 aa15.83■□□□□ 0.12
SNRPA1-202ENST00000394082 OR9A2Q8NGT5 310 aa15.83■□□□□ 0.12
SNRPA1-202ENST00000394082 RDH11Q8TC12 318 aa15.83■□□□□ 0.12
SNRPA1-202ENST00000394082 MTBPQ96DY7 904 aa15.83■□□□□ 0.12
SNRPA1-202ENST00000394082 ACPTQ9BZG2 426 aa15.83■□□□□ 0.12
SNRPA1-202ENST00000394082 FOLH1BQ9HBA9 442 aa15.83■□□□□ 0.12
SNRPA1-202ENST00000394082 EIF3LQ9Y262 564 aaKnown RBP15.83■□□□□ 0.12
SNRPA1-202ENST00000394082 NSD1Q96L73 2696 aaPredicted RBP15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 A0A087WUV0 522 aaPredicted RBP15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 A0A087WV62 115 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 GNG14A0A1W2PPG7 69 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 A0A1W2PPR1 153 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 CCDC151A5D8V7 595 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 SUPT7LO94864 414 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 PEPDP12955 493 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 TSPAN8P19075 237 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 IMPDH1P20839 514 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 STARP49675 285 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 B3GALT5-AS1P59052 145 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 ACSM2AQ08AH3 577 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 FGFBP1Q14512 234 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 WHAMMP3Q1A5X7 153 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 CYP27C1Q4G0S4 372 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 UNC50Q53HI1 259 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 ACSM2BQ68CK6 577 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 NPSR1Q6W5P4 371 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 GPRIN3Q6ZVF9 776 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 CXorf67Q86X51 503 aaPredicted RBP15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 KRTAP1-3Q8IUG1 177 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 SLC22A9Q8IVM8 553 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 GCNT2Q8N0V5 402 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 MMGT1Q8N4V1 131 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 METTL6Q8TCB7 284 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 C16orf78Q8WTQ4 265 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 HBEGFQ99075 208 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 PFDN4Q9NQP4 134 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 TAS2R7Q9NYW3 318 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 DKKL1Q9UK85 242 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 ABCG2Q9UNQ0 655 aa15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 WBP11Q9Y2W2 641 aaKnown RBP15.82■□□□□ 0.12
SNRPA1-202ENST00000394082 FAM171A2A8MVW0 826 aa15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 B4DXG7 233 aa15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 POC1B-GALNT4F8VUJ3 575 aa15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 ARHGEF9O43307 516 aa15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 CTIFO43310 598 aaKnown RBP15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 COQ9O75208 318 aa15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 TNFRSF21O75509 655 aa15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 TGM6O95932 706 aa15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 ENO1P06733 434 aaKnown RBP15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 IFI6P09912 130 aa15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 TIA1P31483 386 aaKnown RBP eCLIP15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 MC3RP41968 323 aa15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 PKNOX1P55347 436 aa15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 NKX6-1P78426 367 aaPredicted RBP15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 PSG6Q00889 435 aa15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 TCHHL1Q5QJ38 904 aaPredicted RBP15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 CHMP1BQ7LBR1 199 aa15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 FAM9CQ8IZT9 166 aa15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 KAT2AQ92830 837 aa15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 PIGTQ969N2 578 aa15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 STARD4Q96DR4 205 aa15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 TMEM237Q96Q45 408 aa15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 ANKRA2Q9H9E1 313 aa15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 SDHAF3Q9NRP4 125 aa15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 ELOVL5Q9NYP7 299 aa15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 ZNF226Q9NYT6 803 aa15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 DMGDHQ9UI17 866 aaKnown RBP15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 GRID1Q9ULK0 1009 aa15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.81■□□□□ 0.12
SNRPA1-202ENST00000394082 SLC22A20A6NK97 555 aa15.8■□□□□ 0.12
SNRPA1-202ENST00000394082 MYO1GB0I1T2 1018 aa15.8■□□□□ 0.12
SNRPA1-202ENST00000394082 DLX3O60479 287 aa15.8■□□□□ 0.12
SNRPA1-202ENST00000394082 ABHD2P08910 425 aa15.8■□□□□ 0.12
SNRPA1-202ENST00000394082 INHBBP09529 407 aa15.8■□□□□ 0.12
SNRPA1-202ENST00000394082 CHN1P15882 459 aa15.8■□□□□ 0.12
SNRPA1-202ENST00000394082 DDCP20711 480 aa15.8■□□□□ 0.12
SNRPA1-202ENST00000394082 ATP5F1P24539 256 aaPredicted RBP15.8■□□□□ 0.12
SNRPA1-202ENST00000394082 ECHS1P30084 290 aa15.8■□□□□ 0.12
SNRPA1-202ENST00000394082 HMOX2P30519 316 aa15.8■□□□□ 0.12
SNRPA1-202ENST00000394082 EVI2BP34910 448 aa15.8■□□□□ 0.12
SNRPA1-202ENST00000394082 PRKAA2P54646 552 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms