RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 KRT20P35900 424 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 RNF144AP50876 292 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 CASP9P55211 416 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 CASP6P55212 293 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 RPS26P62854 115 aaKnown RBP7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 STX5Q13190 355 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 SLC10A1Q14973 349 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 TOMM20Q15388 145 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 CDSNQ15517 529 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 HYAL4Q2M3T9 481 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 SLC9B1Q4ZJI4 515 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 EIPR1Q53HC9 387 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 EMC4Q5J8M3 183 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 TMEM198Q66K66 360 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 ATG16L1Q676U5 607 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 NXNQ6DKJ4 435 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 OR5M10Q6IEU7 315 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 OR4F3Q6IEY1 312 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 ARHGAP11AQ6P4F7 1023 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 Q6ZPB1 254 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 TRILQ7L0X0 811 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 NUP54Q7Z3B4 507 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 R3HCC1LQ7Z5L2 792 aaKnown RBP7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 ZAR1Q86SH2 424 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 ANKRD46Q86W74 232 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 MARVELD2Q8N4S9 558 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 SLC16A11Q8NCK7 471 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 ZFP28Q8NHY6 868 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 FAM57AQ8TBR7 257 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 GPR151Q8TDV0 419 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 SLC9A6Q92581 669 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 JADE3Q92613 823 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 ZNF75CPQ92670 426 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 KCTD12Q96CX2 325 aaKnown RBP7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 MTERF3Q96E29 417 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 RMND5BQ96G75 393 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 SLC35A4Q96G79 324 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 ZNF764Q96H86 408 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 TEX37Q96LM6 180 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 LMF2Q9BU23 707 aaKnown RBP7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 DUSP26Q9BV47 211 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 RTN4RQ9BZR6 473 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 LDAHQ9H6V9 325 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 EXO5Q9H790 373 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 SLCO1B3Q9NPD5 702 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 SERHLQ9NQF3 203 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 PNPLA3Q9NST1 481 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 ACSS1Q9NUB1 689 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 ZCCHC3Q9NUD5 404 aaKnown RBP7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 FBXO34Q9NWN3 711 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 ZNF446Q9NWS9 450 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 ASIC5Q9NY37 505 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 PLEKHB1Q9UF11 243 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 CBLCQ9ULV8 474 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 C15orf41Q9Y2V0 281 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 MEMO1Q9Y316 297 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 SLC6A5Q9Y345 797 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 CNTRLQ7Z7A1 2325 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 C15orf38-AP3S2A0A0A6YYH1 394 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 TRGV5A0A0B4J1U4 118 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 ANKRD33BA6NCL7 494 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 KDM4EB2RXH2 506 aaPredicted RBP7□□□□□ -1.29
HMGB3P1-201ENST00000393368 ZNF195O14628 629 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 PRRG2O14669 202 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 ANKRD28O15084 1053 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 HDAC3O15379 428 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 CFLARO15519 480 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 EMC8O43402 210 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 SLITRK5O94991 958 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 IGHG3P01860 377 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 NAGAP17050 411 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 PTPN6P29350 595 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 IL12AP29459 219 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 EVI2BP34910 448 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 MAN2A2P49641 1150 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 PER3P56645 1201 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 WNT3P56703 355 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 CLDN8P56748 225 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 UFM1P61960 85 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 HBA1P69905 142 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 RPP38P78345 283 aaKnown RBP7□□□□□ -1.29
HMGB3P1-201ENST00000393368 PHC1P78364 1004 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 MRPS22P82650 360 aaKnown RBP7□□□□□ -1.29
HMGB3P1-201ENST00000393368 MAD2L1Q13257 205 aaPredicted RBP7□□□□□ -1.29
HMGB3P1-201ENST00000393368 TP53BP2Q13625 1128 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 LASP1Q14847 261 aaKnown RBP7□□□□□ -1.29
HMGB3P1-201ENST00000393368 ZNHIT3Q15649 155 aaPredicted RBP7□□□□□ -1.29
HMGB3P1-201ENST00000393368 DUSP5Q16690 384 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 SPDYE7PQ495Y7 208 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 SPANXN4Q5MJ08 99 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 WIPI1Q5MNZ9 446 aaPredicted RBP7□□□□□ -1.29
HMGB3P1-201ENST00000393368 TBCELQ5QJ74 424 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 DCST1Q5T197 706 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 CCNJQ5T5M9 372 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 TIGD3Q6B0B8 471 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 MFSD12Q6NUT3 480 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 ZNF585AQ6P3V2 769 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 FIGNL1Q6PIW4 674 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 BNC2Q6ZN30 1099 aaPredicted RBP7□□□□□ -1.29
HMGB3P1-201ENST00000393368 RGS9BPQ6ZS82 235 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms