RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 FEZF1A0PJY2 475 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 RYKP34925 604 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 CXCL12P48061 93 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 LGALS3BPQ08380 585 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 CAPRIN1Q14444 709 aaKnown RBP17.86■□□□□ 0.45
CCDC50-202ENST00000392456 TMEFF1Q8IYR6 380 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 PHACTR4Q8IZ21 702 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 OR4E2Q8NGC2 313 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 OR2A1Q8NGT9 310 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 KLHDC7BQ96G42 594 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 ZIM2Q9NZV7 527 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 VPS29Q9UBQ0 182 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 ENTPD4Q9Y227 616 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 TTC28Q96AY4 2481 aa17.85■□□□□ 0.45
CCDC50-202ENST00000392456 SAP18O00422 153 aaKnown RBP17.85■□□□□ 0.45
CCDC50-202ENST00000392456 ERN1O75460 977 aaKnown RBP17.85■□□□□ 0.45
CCDC50-202ENST00000392456 TGFB1P01137 390 aa17.85■□□□□ 0.45
CCDC50-202ENST00000392456 IFNA7P01567 189 aa17.85■□□□□ 0.45
CCDC50-202ENST00000392456 HK1P19367 917 aa17.85■□□□□ 0.45
CCDC50-202ENST00000392456 GADD45AP24522 165 aa17.85■□□□□ 0.45
CCDC50-202ENST00000392456 PEBP1P30086 187 aaKnown RBP17.85■□□□□ 0.45
CCDC50-202ENST00000392456 LIPAP38571 399 aa17.85■□□□□ 0.45
CCDC50-202ENST00000392456 TATDN3Q17R31 274 aa17.85■□□□□ 0.45
CCDC50-202ENST00000392456 C17orf64Q86WR6 236 aa17.85■□□□□ 0.45
CCDC50-202ENST00000392456 GJD3Q8N144 294 aa17.85■□□□□ 0.45
CCDC50-202ENST00000392456 TBC1D19Q8N5T2 526 aa17.85■□□□□ 0.45
CCDC50-202ENST00000392456 SLC37A3Q8NCC5 494 aa17.85■□□□□ 0.45
CCDC50-202ENST00000392456 CMTM7Q96FZ5 175 aa17.85■□□□□ 0.45
CCDC50-202ENST00000392456 MRPL48Q96GC5 212 aaKnown RBP17.85■□□□□ 0.45
CCDC50-202ENST00000392456 TSSK3Q96PN8 268 aa17.85■□□□□ 0.45
CCDC50-202ENST00000392456 MVB12BQ9H7P6 319 aa17.85■□□□□ 0.45
CCDC50-202ENST00000392456 ZNF275Q9NSD4 429 aaPredicted RBP17.85■□□□□ 0.45
CCDC50-202ENST00000392456 UBQLN2Q9UHD9 624 aa17.85■□□□□ 0.45
CCDC50-202ENST00000392456 TPRKBQ9Y3C4 175 aa17.85■□□□□ 0.45
CCDC50-202ENST00000392456 TNFP01375 233 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 LCKP06239 509 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 SDC1P18827 310 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 QPRTQ15274 297 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 MICAQ29983 383 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 GPBAR1Q8TDU6 330 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 HSPA12BQ96MM6 686 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 ITPAQ9BY32 194 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 PRM3Q9NNZ6 103 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 COPZ2Q9P299 210 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 SLC6A14Q9UN76 642 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 LOC100130705A0A1B0GUX0 176 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 SERTM1A2A2V5 107 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 TRABD2BA6NFA1 517 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 WASHC1A8K0Z3 465 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 SGCEO43556 437 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 TBX6O95947 436 aaPredicted RBP17.84■□□□□ 0.45
CCDC50-202ENST00000392456 B3GALT4O96024 378 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 F3P13726 295 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 PRPH2P23942 346 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 CD27P26842 260 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 TNFSF8P32971 234 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 CTSKP43235 329 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 STARP49675 285 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 HOXC5Q00444 222 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 NOXRED1Q6NXP6 359 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 WASH2PQ6VEQ5 465 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 RIMKLAQ8IXN7 391 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 LAS2Q8IYD9 372 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 GPR156Q8NFN8 814 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 COQ8BQ96D53 544 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 C11orf24Q96F05 449 aaPredicted RBP17.84■□□□□ 0.45
CCDC50-202ENST00000392456 TMEM68Q96MH6 324 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 EFCAB11Q9BUY7 163 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 C1QTNF6Q9BXI9 259 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 C11orf54Q9H0W9 315 aaPredicted RBP17.84■□□□□ 0.45
CCDC50-202ENST00000392456 SMURF2Q9HAU4 748 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 RNF6Q9Y252 685 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 PCDHA9Q9Y5H5 950 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 TECTAO75443 2155 aa17.84■□□□□ 0.45
CCDC50-202ENST00000392456 A0A1B0GTQ1 180 aa17.83■□□□□ 0.45
CCDC50-202ENST00000392456 SIGLEC6O43699 453 aa17.83■□□□□ 0.45
CCDC50-202ENST00000392456 CYP7B1O75881 506 aa17.83■□□□□ 0.45
CCDC50-202ENST00000392456 LRATO95237 230 aa17.83■□□□□ 0.45
CCDC50-202ENST00000392456 HTR3BO95264 441 aa17.83■□□□□ 0.45
CCDC50-202ENST00000392456 RNF224P0DH78 156 aa17.83■□□□□ 0.45
CCDC50-202ENST00000392456 KIR2DL3P43628 341 aa17.83■□□□□ 0.45
CCDC50-202ENST00000392456 POU3F4P49335 361 aa17.83■□□□□ 0.45
CCDC50-202ENST00000392456 ILF3Q12906 894 aaKnown RBP eCLIP17.83■□□□□ 0.45
CCDC50-202ENST00000392456 SYT16Q17RD7 645 aa17.83■□□□□ 0.45
CCDC50-202ENST00000392456 TOR1AIP1Q5JTV8 583 aa17.83■□□□□ 0.45
CCDC50-202ENST00000392456 SLC35F1Q5T1Q4 408 aa17.83■□□□□ 0.45
CCDC50-202ENST00000392456 B3GNT8Q7Z7M8 397 aa17.83■□□□□ 0.45
CCDC50-202ENST00000392456 LRRC58Q96CX6 371 aa17.83■□□□□ 0.45
CCDC50-202ENST00000392456 MUC13Q9H3R2 512 aa17.83■□□□□ 0.45
CCDC50-202ENST00000392456 TAAR2Q9P1P5 351 aa17.83■□□□□ 0.45
CCDC50-202ENST00000392456 KCNK7Q9Y2U2 307 aa17.83■□□□□ 0.45
CCDC50-202ENST00000392456 EML5Q05BV3 1969 aa17.83■□□□□ 0.45
CCDC50-202ENST00000392456 A0A1W2PR77 199 aa17.83■□□□□ 0.44
CCDC50-202ENST00000392456 FAM234BA2RU67 622 aa17.83■□□□□ 0.44
CCDC50-202ENST00000392456 MFSD2BA6NFX1 497 aa17.83■□□□□ 0.44
CCDC50-202ENST00000392456 KRBOX1C9JBD0 128 aa17.83■□□□□ 0.44
CCDC50-202ENST00000392456 PRICKLE3O43900 615 aaPredicted RBP17.83■□□□□ 0.44
CCDC50-202ENST00000392456 TGM6O95932 706 aa17.83■□□□□ 0.44
CCDC50-202ENST00000392456 PLATP00750 562 aa17.83■□□□□ 0.44
CCDC50-202ENST00000392456 GBAP04062 536 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms