RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 TIGD3Q6B0B8 471 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 LARP4Q71RC2 724 aaKnown RBP eCLIP11.6□□□□□ -0.55
GGPS1-203ENST00000391855 CAMKMTQ7Z624 323 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 MRGPRGQ86SM5 289 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 OR1J4Q8NGS1 313 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 MGARPQ8TDB4 240 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 RNF138Q8WVD3 245 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 ITLN2Q8WWU7 325 aaPredicted RBP11.6□□□□□ -0.55
GGPS1-203ENST00000391855 OR5P2Q8WZ92 322 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 HOXB13Q92826 284 aaPredicted RBP11.6□□□□□ -0.55
GGPS1-203ENST00000391855 NODALQ96S42 347 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 DMRTA2Q96SC8 542 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 ADOQ96SZ5 270 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 BHLHE41Q9C0J9 482 aaPredicted RBP11.6□□□□□ -0.55
GGPS1-203ENST00000391855 C20orf27Q9GZN8 174 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 UBQLN3Q9H347 655 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 HHATLQ9HCP6 504 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 CBLCQ9ULV8 474 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 ABCG2Q9UNQ0 655 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 LIPGQ9Y5X9 500 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 EML6Q6ZMW3 1958 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 A0A1W2PRB8 838 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 TRPC5OSA6NMA1 111 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 NPIPA2E9PIF3 369 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 NPIPA3F8WFD2 350 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 WDR1O75083 606 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 SOX30O94993 753 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 KCNH1O95259 989 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 HOXD4P09016 255 aaPredicted RBP11.59□□□□□ -0.55
GGPS1-203ENST00000391855 CELA3AP09093 270 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 RFPL3SP0C7P2 107 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 G6PDP11413 515 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 LBPP18428 481 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 PTPN6P29350 595 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 PTGER4P35408 488 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 PRIM2P49643 509 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 CDK9P50750 372 aaKnown RBP11.59□□□□□ -0.55
GGPS1-203ENST00000391855 ADORA2A-AS1P86434 159 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 WLSQ5T9L3 541 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 FNDC7Q5VTL7 733 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 OGFOD2Q6N063 350 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 ANGPTL8Q6UXH0 198 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 HDXQ7Z353 690 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 RIMKLAQ8IXN7 391 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 GOLGA6L1Q8N7Z2 621 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 NUP43Q8NFH3 380 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 PSMA8Q8TAA3 256 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 NEIL3Q8TAT5 605 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 MOAP1Q96BY2 351 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 COQ8BQ96D53 544 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 NUF2Q9BZD4 464 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 ZNF395Q9H8N7 513 aaPredicted RBP11.59□□□□□ -0.55
GGPS1-203ENST00000391855 AKTIPQ9H8T0 292 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 VIPAS39Q9H9C1 493 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 MEAF6Q9HAF1 191 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 WIF1Q9Y5W5 379 aa11.59□□□□□ -0.55
GGPS1-203ENST00000391855 FAM47E-STBD1D6RA91 191 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 ADAM10O14672 748 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 KLF11O14901 512 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 HDAC3O15379 428 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 ICOSLGO75144 302 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 CBR3O75828 277 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 NKX2-2O95096 273 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 IL33O95760 270 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 CLDN1O95832 211 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 KRT16P08779 473 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 LAMP1P11279 417 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 GABRA1P14867 456 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 PTGDSP41222 190 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 CLK3P49761 638 aaKnown RBP11.58□□□□□ -0.56
GGPS1-203ENST00000391855 SF3B4Q15427 424 aaKnown RBP eCLIP11.58□□□□□ -0.56
GGPS1-203ENST00000391855 DPY19L1Q2PZI1 675 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 GXYLT1Q4G148 440 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 MFSD12Q6NUT3 480 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 ACAD11Q709F0 780 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 SZRD1Q7Z422 152 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 OR7A2PQ8NGA2 310 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 OR56A1Q8NGH5 318 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 SFXN5Q8TD22 340 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 ZBTB9Q96C00 473 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 EFHD2Q96C19 240 aaPredicted RBP11.58□□□□□ -0.56
GGPS1-203ENST00000391855 ATP6V1G3Q96LB4 118 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 DUSP26Q9BV47 211 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 DPY30Q9C005 99 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 MANSC1Q9H8J5 431 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 SDHAF3Q9NRP4 125 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 ZCCHC3Q9NUD5 404 aaKnown RBP11.58□□□□□ -0.56
GGPS1-203ENST00000391855 FAM120CQ9NX05 1096 aaKnown RBP11.58□□□□□ -0.56
GGPS1-203ENST00000391855 COQ3Q9NZJ6 369 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 ACAD8Q9UKU7 415 aa11.58□□□□□ -0.56
GGPS1-203ENST00000391855 DIDO1Q9BTC0 2240 aaKnown RBP11.58□□□□□ -0.56
GGPS1-203ENST00000391855 GTF3C1Q12789 2109 aa11.57□□□□□ -0.56
GGPS1-203ENST00000391855 FLNBO75369 2602 aaKnown RBP11.57□□□□□ -0.56
GGPS1-203ENST00000391855 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.57□□□□□ -0.56
GGPS1-203ENST00000391855 GNB5O14775 395 aa11.57□□□□□ -0.56
GGPS1-203ENST00000391855 NME6O75414 186 aaPredicted RBP11.57□□□□□ -0.56
GGPS1-203ENST00000391855 TRAPPC6AO75865 159 aa11.57□□□□□ -0.56
GGPS1-203ENST00000391855 CYP4B1P13584 511 aa11.57□□□□□ -0.56
GGPS1-203ENST00000391855 H2AFXP16104 143 aaPredicted RBP11.57□□□□□ -0.56
GGPS1-203ENST00000391855 ACVR2AP27037 513 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms