RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 TCEAL8Q8IYN2 117 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 OR8K3Q8NH51 312 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 SETD7Q8WTS6 366 aaKnown RBP18.68■□□□□ 0.58
SHANK1-203ENST00000391813 ADAMTS14Q8WXS8 1223 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 NTMT1Q9BV86 223 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 TTTY10Q9BZA0 68 aa18.68■□□□□ 0.58
SHANK1-203ENST00000391813 HPGDSO60760 199 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 SDC1P18827 310 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 HSD11B1P28845 292 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 ZMYND11Q15326 602 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 CDNFQ49AH0 187 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 RTP2Q5QGT7 225 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 SUSD1Q6UWL2 747 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 ARL14Q8N4G2 192 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 KLHDC9Q8NEP7 349 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 OR52P1PQ8NH57 321 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 SORCS1Q8WY21 1168 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 FCRL1Q96LA6 429 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 SLC12A9Q9BXP2 914 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 KATNBL1Q9H079 304 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 SPHK2Q9NRA0 654 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 NAALAD2Q9Y3Q0 740 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 E7EQ34 232 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 RNASET2O00584 256 aaKnown RBP18.67■□□□□ 0.58
SHANK1-203ENST00000391813 GOSR2O14653 212 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 ARPC1BO15143 372 aaKnown RBP18.67■□□□□ 0.58
SHANK1-203ENST00000391813 COCHO43405 550 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 SULT1C4O75897 302 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 SFTPBP07988 381 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 PRSS3P35030 304 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 IDUAP35475 653 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 NAA10P41227 235 aaPredicted RBP18.67■□□□□ 0.58
SHANK1-203ENST00000391813 MAPK14Q16539 360 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 HRASLS5Q96KN8 279 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 CCDC86Q9H6F5 360 aaKnown RBP18.67■□□□□ 0.58
SHANK1-203ENST00000391813 MYH14Q7Z406 1995 aaKnown RBP18.67■□□□□ 0.58
SHANK1-203ENST00000391813 ARHGAP33O14559 1287 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 NPC1O15118 1278 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 TNFRSF1BP20333 461 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 GIFP27352 417 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 SOX9P48436 509 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 CDC20Q12834 499 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 DGLUCYQ7Z3D6 616 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 IQCF1Q8N6M8 205 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 ARL5BQ96KC2 179 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 UBXN10Q96LJ8 280 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 ZNF583Q96ND8 569 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 ALG8Q9BVK2 526 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 TBL1XR1Q9BZK7 514 aa18.67■□□□□ 0.58
SHANK1-203ENST00000391813 ARSBP15848 533 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 TMEM115Q12893 351 aaPredicted RBP18.66■□□□□ 0.58
SHANK1-203ENST00000391813 GNMTQ14749 295 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 PELI3Q8N2H9 469 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 DNAJC5GQ8N7S2 189 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 OR1J4Q8NGS1 313 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 C17orf62Q9BQA9 187 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 ZNF416Q9BWM5 594 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 POT1Q9NUX5 634 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 ZNF208O43345 1280 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 CFIP05156 583 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 CSF1P09603 554 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 C8orf89P0DMQ9 161 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 PRDX3P30048 256 aaKnown RBP18.66■□□□□ 0.58
SHANK1-203ENST00000391813 ODF4Q2M2E3 257 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 SLX4IPQ5VYV7 408 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 TPRA1Q86W33 373 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 IGSF8Q969P0 613 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 ABRACLQ9P1F3 81 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 TRBV23OR9-2A0A075B6M9 112 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 ZNF840PA6NDX5 716 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 UBBP0CG47 229 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 UBCP0CG48 685 aaKnown RBP18.66■□□□□ 0.58
SHANK1-203ENST00000391813 HNF1BP35680 557 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 MANEALQ5VSG8 457 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 PLBD1Q6P4A8 553 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 PGAP1Q75T13 922 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 SLC6A7Q99884 636 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 POLDIP3Q9BY77 421 aaKnown RBP18.66■□□□□ 0.58
SHANK1-203ENST00000391813 ACTL8Q9H568 366 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 BRF2Q9HAW0 419 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 GPR52Q9Y2T5 361 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 LCMT2O60294 686 aaKnown RBP18.66■□□□□ 0.58
SHANK1-203ENST00000391813 AMY2AP04746 511 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 AK4P27144 223 aaPredicted RBP18.66■□□□□ 0.58
SHANK1-203ENST00000391813 POLR2IP36954 125 aaKnown RBP18.66■□□□□ 0.58
SHANK1-203ENST00000391813 NDUFAF5Q5TEU4 345 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 Q6ZVU0 165 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 CCDC116Q8IYX3 515 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 UHRF1Q96T88 793 aaPredicted RBP18.66■□□□□ 0.58
SHANK1-203ENST00000391813 DPYSL5Q9BPU6 564 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 PELOQ9BRX2 385 aaKnown RBP18.66■□□□□ 0.58
SHANK1-203ENST00000391813 ZFP57Q9NU63 452 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 BOLA1Q9Y3E2 137 aa18.66■□□□□ 0.58
SHANK1-203ENST00000391813 SCDO00767 359 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 ITGA5P08648 1049 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 ACP5P13686 325 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 RBMS1P29558 406 aaKnown RBP18.65■□□□□ 0.58
SHANK1-203ENST00000391813 ZNF91Q05481 1191 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 KCT2Q8NC54 265 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms