RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 NPRL3Q12980 569 aa1.9□□□□□ -2.11
TRAV40-201ENST00000390467 CLPPQ16740 277 aaPredicted RBP1.9□□□□□ -2.11
TRAV40-201ENST00000390467 HSD17B13Q7Z5P4 300 aaPredicted RBP1.9□□□□□ -2.11
TRAV40-201ENST00000390467 SNX32Q86XE0 403 aa1.9□□□□□ -2.11
TRAV40-201ENST00000390467 SYCP3Q8IZU3 236 aa1.9□□□□□ -2.11
TRAV40-201ENST00000390467 RNASE8Q8TDE3 154 aaKnown RBP1.9□□□□□ -2.11
TRAV40-201ENST00000390467 C18orf25Q96B23 403 aaPredicted RBP1.9□□□□□ -2.11
TRAV40-201ENST00000390467 NLNQ9BYT8 704 aa1.9□□□□□ -2.11
TRAV40-201ENST00000390467 XPO4Q9C0E2 1151 aaKnown RBP1.9□□□□□ -2.11
TRAV40-201ENST00000390467 TSPYL1Q9H0U9 437 aa1.9□□□□□ -2.11
TRAV40-201ENST00000390467 GLIPR2Q9H4G4 154 aa1.9□□□□□ -2.11
TRAV40-201ENST00000390467 PTGES2Q9H7Z7 377 aa1.9□□□□□ -2.11
TRAV40-201ENST00000390467 ZCCHC17Q9NP64 241 aaKnown RBP1.9□□□□□ -2.11
TRAV40-201ENST00000390467 VPS54Q9P1Q0 977 aa1.9□□□□□ -2.11
TRAV40-201ENST00000390467 NARFQ9UHQ1 456 aa1.9□□□□□ -2.11
TRAV40-201ENST00000390467 LEF1Q9UJU2 399 aaPredicted RBP1.9□□□□□ -2.11
TRAV40-201ENST00000390467 PURGQ9UJV8 347 aaKnown RBP1.9□□□□□ -2.11
TRAV40-201ENST00000390467 TMCC3Q9ULS5 477 aa1.9□□□□□ -2.11
TRAV40-201ENST00000390467 BARX2Q9UMQ3 279 aaPredicted RBP1.9□□□□□ -2.11
TRAV40-201ENST00000390467 A0A0J9YVX5 310 aa1.89□□□□□ -2.11
TRAV40-201ENST00000390467 FAM170AA1A519 330 aa1.89□□□□□ -2.11
TRAV40-201ENST00000390467 TRIM64CA6NLI5 447 aa1.89□□□□□ -2.11
TRAV40-201ENST00000390467 C19orf81C9J6K1 198 aa1.89□□□□□ -2.11
TRAV40-201ENST00000390467 HTATSF1O43719 755 aaKnown RBP1.89□□□□□ -2.11
TRAV40-201ENST00000390467 SERPINF2P08697 491 aa1.89□□□□□ -2.11
TRAV40-201ENST00000390467 OAS2P29728 719 aaKnown RBP1.89□□□□□ -2.11
TRAV40-201ENST00000390467 SNU13P55769 128 aaKnown RBP1.89□□□□□ -2.11
TRAV40-201ENST00000390467 KRT83P78385 493 aa1.89□□□□□ -2.11
TRAV40-201ENST00000390467 ROR1Q01973 937 aa1.89□□□□□ -2.11
TRAV40-201ENST00000390467 EGFEM1PQ0D2K5 195 aa1.89□□□□□ -2.11
TRAV40-201ENST00000390467 HSP90AB3PQ58FF7 597 aa1.89□□□□□ -2.11
TRAV40-201ENST00000390467 OR2B11Q5JQS5 317 aa1.89□□□□□ -2.11
TRAV40-201ENST00000390467 NKAIN2Q5VXU1 208 aa1.89□□□□□ -2.11
TRAV40-201ENST00000390467 MEDAGQ5VYS4 303 aa1.89□□□□□ -2.11
TRAV40-201ENST00000390467 PLBD1Q6P4A8 553 aa1.89□□□□□ -2.11
TRAV40-201ENST00000390467 KCTD9Q7L273 389 aa1.89□□□□□ -2.11
TRAV40-201ENST00000390467 GALNTL5Q7Z4T8 443 aa1.89□□□□□ -2.11
TRAV40-201ENST00000390467 ZNF589Q86UQ0 364 aaPredicted RBP1.89□□□□□ -2.11
TRAV40-201ENST00000390467 LCA5Q86VQ0 697 aa1.89□□□□□ -2.11
TRAV40-201ENST00000390467 NBPF5PQ86XG9 351 aaPredicted RBP1.89□□□□□ -2.11
TRAV40-201ENST00000390467 ZNF561Q8N587 486 aa1.89□□□□□ -2.11
TRAV40-201ENST00000390467 ARL6IP6Q8N6S5 226 aa1.89□□□□□ -2.11
TRAV40-201ENST00000390467 NAT8LQ8N9F0 302 aa1.89□□□□□ -2.11
TRAV40-201ENST00000390467 CCDC71LQ8N9Z2 235 aa1.89□□□□□ -2.11
TRAV40-201ENST00000390467 DCAF4L2Q8NA75 395 aa1.89□□□□□ -2.11
TRAV40-201ENST00000390467 ZBTB44Q8NCP5 570 aa1.89□□□□□ -2.11
TRAV40-201ENST00000390467 ZNF540Q8NDQ6 660 aa1.89□□□□□ -2.11
TRAV40-201ENST00000390467 FIBINQ8TAL6 211 aa1.89□□□□□ -2.11
TRAV40-201ENST00000390467 DLX4Q92988 240 aaPredicted RBP1.89□□□□□ -2.11
TRAV40-201ENST00000390467 GPR137Q96N19 417 aa1.89□□□□□ -2.11
TRAV40-201ENST00000390467 CNPY3Q9BT09 278 aa1.89□□□□□ -2.11
TRAV40-201ENST00000390467 ZNF175Q9Y473 711 aa1.89□□□□□ -2.11
TRAV40-201ENST00000390467 TRBV7-9A0A0J9YWB2 115 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 LRIT2A6NDA9 550 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 ERVV-1B6SEH8 477 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 ANKRD63C9JTQ0 380 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 SLC28A1O00337 649 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 SNAI2O43623 268 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 TRAF3IP2O43734 574 aaPredicted RBP1.88□□□□□ -2.11
TRAV40-201ENST00000390467 SEMG1P04279 462 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 SFTPBP07988 381 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 HNRNPA2B1P22626 353 aaKnown RBP1.88□□□□□ -2.11
TRAV40-201ENST00000390467 NF2P35240 595 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 NPY2RP49146 381 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 SGSHP51688 502 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 BPIFB3P59826 476 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 DPYSQ14117 519 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 EIF2B1Q14232 305 aaKnown RBP1.88□□□□□ -2.11
TRAV40-201ENST00000390467 CAMK4Q16566 473 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 IFI44LQ53G44 452 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 DNAJC21Q5F1R6 531 aaKnown RBP1.88□□□□□ -2.11
TRAV40-201ENST00000390467 CCDC73Q6ZRK6 1079 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 FRA10AC1Q70Z53 315 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 PRSS42Q7Z5A4 293 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 PARGQ86W56 976 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 OR8H3Q8N146 312 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 CSNK1A1LQ8N752 337 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 ZNF713Q8N859 430 aaPredicted RBP1.88□□□□□ -2.11
TRAV40-201ENST00000390467 ZNF397Q8NF99 534 aaPredicted RBP1.88□□□□□ -2.11
TRAV40-201ENST00000390467 ANP32BQ92688 251 aaKnown RBP1.88□□□□□ -2.11
TRAV40-201ENST00000390467 SLC35E1Q96K37 410 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 NICN1Q9BSH3 213 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 GLT8D2Q9H1C3 349 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 ABCB8Q9NUT2 735 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 ELOVL2Q9NXB9 296 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 DCAF16Q9NXF7 216 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 ERVK-18Q9QC07 812 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 XPO7Q9UIA9 1087 aaKnown RBP1.88□□□□□ -2.11
TRAV40-201ENST00000390467 SMC3Q9UQE7 1217 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 LIPT1Q9Y234 373 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 WSB1Q9Y6I7 421 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 PTCH1Q13635 1447 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 PTPRUQ92729 1446 aa1.88□□□□□ -2.11
TRAV40-201ENST00000390467 NPC1L1Q9UHC9 1359 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 A0A1W2PQ67 120 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 SMIM30A4D0T7 59 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 C5orf51A6NDU8 294 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 USP27XA6NNY8 438 aa1.87□□□□□ -2.11
TRAV40-201ENST00000390467 CACNB4O00305 520 aaPredicted RBP1.87□□□□□ -2.11
TRAV40-201ENST00000390467 ABCD4O14678 606 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms