RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 FAAH2Q6GMR7 532 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 LCN10Q6JVE6 187 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 FIGNL1Q6PIW4 674 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 FRRS1Q6ZNA5 592 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 PACRGLQ8N7B6 248 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 COX18Q8N8Q8 333 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 OR4N2Q8NGD1 307 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 OR5K1Q8NHB7 308 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 PTPMT1Q8WUK0 201 aaPredicted RBP11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 PROX1Q92786 737 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 ZNF300Q96RE9 604 aaPredicted RBP11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 SDF2Q99470 211 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 MESP1Q9BRJ9 268 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 VN1R1Q9GZP7 353 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 PIGUQ9H490 435 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 AKIRIN1Q9H9L7 192 aaPredicted RBP11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 FOLH1BQ9HBA9 442 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 LIPT1Q9Y234 373 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 ZNF451Q9Y4E5 1061 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 COL5A1P20908 1838 aaPredicted RBP11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 IGKV3D-11A0A0A0MRZ8 115 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 SEMA7AO75326 666 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 ALPLP05186 524 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 GP1BAP07359 652 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 GNAO1P09471 354 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 ETS2P15036 469 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 HOXB6P17509 224 aaKnown RBP11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 MAP3K8P41279 467 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 HPCAP84074 193 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 PSG6Q00889 435 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 DAG1Q14118 895 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 SERTAD2Q14140 314 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 NSDHLQ15738 373 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 GPR68Q15743 365 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 ARHGAP11BQ3KRB8 267 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 NKAIN1Q4KMZ8 207 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 DCST2Q5T1A1 773 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 TYW3Q6IPR3 259 aaKnown RBP11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 QSOX2Q6ZRP7 698 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 CARM1Q86X55 608 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 NAXDQ8IW45 347 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 SDCCAG3Q96C92 435 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 OSBPL11Q9BXB4 747 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 REEP1Q9H902 201 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 MMACHCQ9Y4U1 282 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 HEMK1Q9Y5R4 338 aaPredicted RBP11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 MUC6Q6W4X9 2439 aa11.34□□□□□ -0.59
SPTBN1-203ENST00000389980 DSPPQ9NZW4 1301 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 CLDN24A6NM45 220 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 H0YJX3 145 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 FRS3O43559 492 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 CLIC3O95833 236 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 CLPSP04118 112 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 IFNW1P05000 195 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 ALPPP05187 535 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 ZNF28P17035 718 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 ALDH3A2P51648 485 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 CDH12P55289 794 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 SPIBQ01892 262 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 ZNF311Q5JNZ3 666 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 SHQ1Q6PI26 577 aaKnown RBP11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 DEF8Q6ZN54 512 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 LANCL3Q6ZV70 420 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 ZAR1Q86SH2 424 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 SATL1Q86VE3 508 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 LSRQ86X29 649 aaPredicted RBP11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 SVOPLQ8N434 492 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 BMPERQ8N8U9 685 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 AGBL5Q8NDL9 886 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 C16orf52Q8NHV5 167 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 STT3BQ8TCJ2 826 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 RMND5BQ96G75 393 aaPredicted RBP11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 SENP5Q96HI0 755 aaPredicted RBP11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 ZNF354BQ96LW1 612 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 BTBD2Q9BX70 525 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 OR10A5Q9H207 317 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 MKKSQ9NPJ1 570 aaPredicted RBP11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 DUSP22Q9NRW4 184 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 THSD1Q9NS62 852 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 SEMA4GQ9NTN9 838 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 RLIMQ9NVW2 624 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 HCN4Q9Y3Q4 1203 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 WDR45Q9Y484 360 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 RIF1Q5UIP0 2472 aaKnown RBP11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 C4orf47A7E2U8 309 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 FFAR1O14842 300 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 POLR1CO15160 346 aaPredicted RBP11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 HS6ST1O60243 411 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 OR6B1O95007 311 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 AGR2O95994 175 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 DNAJA1P31689 397 aaKnown RBP11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 MAPK10P53779 464 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 TXNL4AP83876 142 aaKnown RBP11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 FUT7Q11130 342 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 TCF15Q12870 199 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 CLPPQ16740 277 aaPredicted RBP11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 NPSR1Q6W5P4 371 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 B3GNT6Q6ZMB0 384 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 CYGBQ8WWM9 190 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 VSTM2LQ96N03 204 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms