RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 SIT1Q9Y3P8 196 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 DDX60LQ5H9U9 1706 aaKnown RBP12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 SNAPC5O75971 98 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 C1orf105O95561 183 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 EGFP01133 1207 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 IGHEP01854 428 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 H2BFMP0C1H6 154 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 OR1D4P47884 311 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 TPTEP56180 551 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 HOXC5Q00444 222 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 CRYZQ08257 329 aaKnown RBP12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 SERPINA11Q86U17 422 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 ZNF283Q8N7M2 679 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 ACOT4Q8N9L9 421 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 MYEOVQ96EZ4 313 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 SLC30A3Q99726 388 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 THAP10Q9P2Z0 257 aaPredicted RBP12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 SARDHQ9UL12 918 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 MGAT4AQ9UM21 535 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 AKAP6Q13023 2319 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 TTC28Q96AY4 2481 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 OR2T1O43869 369 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 UBL4AP11441 157 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 PGAM2P15259 253 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 LRIT3Q3SXY7 679 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 ALG10BQ5I7T1 473 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 TSPYL5Q86VY4 417 aaPredicted RBP12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 MCATQ8IVS2 390 aaKnown RBP12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 NAGSQ8N159 534 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 VWA5B2Q8N398 1253 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 SGCDQ92629 289 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 MSLNLQ96KJ4 702 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 UBXN10Q96LJ8 280 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 SH3BGRL2Q9UJC5 107 aa12.28□□□□□ -0.44
PTPRN2-203ENST00000389418 CDK5RAP2Q96SN8 1893 aa12.27□□□□□ -0.44
PTPRN2-203ENST00000389418 LAMB2P55268 1798 aa12.27□□□□□ -0.44
PTPRN2-203ENST00000389418 F10P00742 488 aa12.27□□□□□ -0.44
PTPRN2-203ENST00000389418 IFNA21P01568 189 aa12.27□□□□□ -0.44
PTPRN2-203ENST00000389418 CSN2P05814 226 aa12.27□□□□□ -0.44
PTPRN2-203ENST00000389418 MMP2P08253 660 aa12.27□□□□□ -0.44
PTPRN2-203ENST00000389418 CELP19835 753 aa12.27□□□□□ -0.44
PTPRN2-203ENST00000389418 PCGF2P35227 344 aa12.27□□□□□ -0.44
PTPRN2-203ENST00000389418 SRYQ05066 204 aa12.27□□□□□ -0.44
PTPRN2-203ENST00000389418 MAD2L1BPQ15013 274 aaPredicted RBP12.27□□□□□ -0.44
PTPRN2-203ENST00000389418 CPZQ66K79 652 aa12.27□□□□□ -0.44
PTPRN2-203ENST00000389418 ADAMTSL4Q6UY14 1074 aa12.27□□□□□ -0.44
PTPRN2-203ENST00000389418 TMPPEQ6ZT21 453 aa12.27□□□□□ -0.44
PTPRN2-203ENST00000389418 ACBD7Q8N6N7 88 aa12.27□□□□□ -0.44
PTPRN2-203ENST00000389418 SFXN5Q8TD22 340 aa12.27□□□□□ -0.44
PTPRN2-203ENST00000389418 NETO1Q8TDF5 533 aa12.27□□□□□ -0.44
PTPRN2-203ENST00000389418 ZNF480Q8WV37 535 aa12.27□□□□□ -0.44
PTPRN2-203ENST00000389418 ZNF304Q9HCX3 659 aa12.27□□□□□ -0.44
PTPRN2-203ENST00000389418 FAM118AQ9NWS6 357 aa12.27□□□□□ -0.44
PTPRN2-203ENST00000389418 LRIT1Q9P2V4 623 aa12.27□□□□□ -0.44
PTPRN2-203ENST00000389418 PRRT4C9JH25 899 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 ANKRD28O15084 1053 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 HOXC11O43248 304 aaPredicted RBP12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 B3GALT4O96024 378 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 MT-ND2P03891 347 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 C1SP09871 688 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 CKMT1AP12532 417 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 GRPRP30550 384 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 CCR2P41597 374 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 GLP1RP43220 463 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 MAP2K4P45985 399 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 TMBIM6P55061 237 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 RAB39AQ14964 217 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 GGTA1PQ4G0N0 100 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 RAET1LQ5VY80 246 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 MS4A15Q8N5U1 240 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 SLC5A8Q8N695 610 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 TRUB1Q8WWH5 349 aaKnown RBP12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 TESCQ96BS2 214 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 SLC29A1Q99808 456 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 ACPTQ9BZG2 426 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 ERVK-18Q9QC07 812 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 STOML2Q9UJZ1 356 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 GABBR2O75899 941 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 SPARCP09486 303 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 BMP2P12643 396 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 FOLR3P41439 243 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 RPS26P11Q5JNZ5 115 aaPredicted RBP12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 CTSL3PQ5NE16 218 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 GTF2IRD2BQ6EKJ0 949 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 LRRN1Q6UXK5 716 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 GTF2IRD2Q86UP8 949 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 SLC44A3Q8N4M1 653 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 OR2L8Q8NGY9 312 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 ISOC1Q96CN7 298 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 DDIT4LQ96D03 193 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 MMP27Q9H306 513 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 ARMC1Q9NVT9 282 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 GPR45Q9Y5Y3 372 aa12.27□□□□□ -0.45
PTPRN2-203ENST00000389418 PRAMEF33A0A0G2JMD5 474 aa12.26□□□□□ -0.45
PTPRN2-203ENST00000389418 A8MVJ9 347 aa12.26□□□□□ -0.45
PTPRN2-203ENST00000389418 FOXE1O00358 373 aaPredicted RBP12.26□□□□□ -0.45
PTPRN2-203ENST00000389418 PRAMEF10O60809 474 aa12.26□□□□□ -0.45
PTPRN2-203ENST00000389418 GABARAPL2P60520 117 aa12.26□□□□□ -0.45
PTPRN2-203ENST00000389418 DCAF7P61962 342 aa12.26□□□□□ -0.45
PTPRN2-203ENST00000389418 ARMC10Q8N2F6 343 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms